Variant report

Variant	rs527426570
Chromosome Location	chr11:32448054-32448055
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:32447031..32449133-chr11:32603580..32605616,2	K562	blood:
2	chr11:32445943..32448522-chr11:32612638..32615463,2	K562	blood:
3	chr11:32426521..32428841-chr11:32446378..32448492,2	K562	blood:
4	chr11:32413863..32417759-chr11:32446575..32449998,5	K562	blood:

Variant related genes	Relation type
ENSG00000270903	Chromatin interaction
ENSG00000149100	Chromatin interaction

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832108	chr11:32395937-32560583	Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	nsv1038188	chr11:32410305-32449799	Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
3	nsv1044547	chr11:32435753-32465233	Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
4	esv2753303	chr11:32447324-32494924	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
5	nsv1051559	chr11:32447347-32465233	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:42 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32440800-32448400	Enhancers	Primary hematopoietic stem cells	blood
2	chr11:32447200-32448400	Genic enhancers	Primary hematopoietic stem cells short term culture	blood
3	chr11:32447600-32448200	Bivalent Enhancer	ES-WA7 Cell Line	embryonic stem cell
4	chr11:32447600-32448200	Bivalent Enhancer	Left Ventricle	heart
5	chr11:32447600-32448200	Enhancers	Right Ventricle	heart
6	chr11:32447600-32448400	Bivalent Enhancer	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr11:32447600-32448400	Bivalent Enhancer	Fetal Thymus	thymus
8	chr11:32447600-32448800	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
9	chr11:32447600-32448800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
10	chr11:32447600-32449200	Bivalent Enhancer	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr11:32447600-32449200	Flanking Bivalent TSS/Enh	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr11:32447600-32449800	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
13	chr11:32447600-32450000	Bivalent Enhancer	Fetal Heart	heart
14	chr11:32447800-32448200	Flanking Bivalent TSS/Enh	H9 Cell Line	embryonic stem cell
15	chr11:32447800-32448200	Bivalent Enhancer	Fetal Brain Female	brain
16	chr11:32447800-32448400	Bivalent Enhancer	Brain Hippocampus Middle	brain
17	chr11:32447800-32448600	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr11:32447800-32448600	Enhancers	Ovary	ovary
19	chr11:32447800-32449000	Flanking Bivalent TSS/Enh	H1 Cell Line	embryonic stem cell
20	chr11:32447800-32449800	Bivalent Enhancer	Fetal Brain Male	brain
21	chr11:32447800-32450000	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
22	chr11:32448000-32448200	Bivalent Enhancer	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr11:32448000-32448200	Bivalent Enhancer	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
24	chr11:32448000-32448200	Flanking Bivalent TSS/Enh	HUES64 Cell Line	embryonic stem cell
25	chr11:32448000-32448200	Flanking Bivalent TSS/Enh	iPS DF 6.9 Cell Line	embryonic stem cell
26	chr11:32448000-32448200	Bivalent Enhancer	Brain Germinal Matrix	brain
27	chr11:32448000-32448200	Flanking Active TSS	Right Atrium	heart
28	chr11:32448000-32448200	ZNF genes & repeats	Spleen	Spleen
29	chr11:32448000-32448200	Flanking Active TSS	K562	blood
30	chr11:32448000-32448400	Bivalent/Poised TSS	ES-UCSF4 Cell Line	embryonic stem cell
31	chr11:32448000-32448400	Bivalent Enhancer	Breast Myoepithelial Primary Cells	Breast
32	chr11:32448000-32448400	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--
33	chr11:32448000-32448400	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
34	chr11:32448000-32448400	Bivalent Enhancer	Fetal Stomach	stomach
35	chr11:32448000-32448800	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
36	chr11:32448000-32448800	Weak transcription	Fetal Kidney	kidney
37	chr11:32448000-32449000	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
38	chr11:32448000-32449000	Flanking Bivalent TSS/Enh	Ganglion Eminence derived primary cultured neurospheres	brain
39	chr11:32448000-32449000	Bivalent Enhancer	Placenta	Placenta
40	chr11:32448000-32449600	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
41	chr11:32448000-32450000	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
42	chr11:32448000-32450000	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 1	blood

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