Variant report

Variant	rs527585520
Chromosome Location	chr11:121594414-121594415
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898428	chr11:121568262-121671976	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv832287	chr11:121575379-121722735	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv518668	chr11:121593385-121604656	Enhancers Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:52 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:121592800-121594600	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
2	chr11:121592800-121594600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr11:121592800-121594600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr11:121592800-121594600	Active TSS	Duodenum Smooth Muscle	Duodenum
5	chr11:121592800-121594800	Active TSS	Brain Substantia Nigra	brain
6	chr11:121593000-121594600	Active TSS	Colon Smooth Muscle	Colon
7	chr11:121593000-121594600	Active TSS	Osteobl	bone
8	chr11:121593200-121594600	Flanking Active TSS	HUVEC	blood vessel
9	chr11:121593400-121594600	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr11:121593600-121594600	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
11	chr11:121593600-121594800	Flanking Active TSS	Stomach Smooth Muscle	stomach
12	chr11:121593600-121594800	Enhancers	HepG2	liver
13	chr11:121593800-121594800	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr11:121593800-121594800	Enhancers	Fetal Thymus	thymus
15	chr11:121594000-121594600	Flanking Active TSS	Rectal Smooth Muscle	rectum
16	chr11:121594000-121594800	Flanking Active TSS	Brain Hippocampus Middle	brain
17	chr11:121594000-121594800	Flanking Active TSS	Fetal Brain Female	brain
18	chr11:121594200-121594600	Flanking Bivalent TSS/Enh	iPS-18 Cell Line	embryonic stem cell
19	chr11:121594200-121594600	Flanking Bivalent TSS/Enh	iPS-20b Cell Line	embryonic stem cell
20	chr11:121594200-121594600	Flanking Active TSS	Brain Germinal Matrix	brain
21	chr11:121594200-121594600	Enhancers	Fetal Lung	lung
22	chr11:121594200-121594600	Flanking Active TSS	NH-A	brain
23	chr11:121594200-121594800	Flanking Bivalent TSS/Enh	HUES64 Cell Line	embryonic stem cell
24	chr11:121594200-121594800	Flanking Active TSS	Brain Anterior Caudate	brain
25	chr11:121594200-121594800	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
26	chr11:121594400-121594600	Flanking Bivalent TSS/Enh	H1 Cell Line	embryonic stem cell
27	chr11:121594400-121594600	Enhancers	H9 Cell Line	embryonic stem cell
28	chr11:121594400-121594600	Flanking Bivalent TSS/Enh	HUES48 Cell Line	embryonic stem cell
29	chr11:121594400-121594600	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
30	chr11:121594400-121594600	Flanking Bivalent TSS/Enh	iPS-15b Cell Line	embryonic stem cell
31	chr11:121594400-121594600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
32	chr11:121594400-121594600	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
33	chr11:121594400-121594600	Enhancers	Adipose Nuclei	Adipose
34	chr11:121594400-121594600	Flanking Active TSS	Brain Angular Gyrus	brain
35	chr11:121594400-121594600	Flanking Active TSS	Brain Cingulate Gyrus	brain
36	chr11:121594400-121594600	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
37	chr11:121594400-121594600	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
38	chr11:121594400-121594600	Enhancers	Fetal Muscle Trunk	muscle
39	chr11:121594400-121594600	Enhancers	Fetal Muscle Leg	muscle
40	chr11:121594400-121594600	Flanking Active TSS	Ovary	ovary
41	chr11:121594400-121594600	Enhancers	Skeletal Muscle Female	skeletal muscle
42	chr11:121594400-121594800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
43	chr11:121594400-121594800	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
44	chr11:121594400-121594800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
45	chr11:121594400-121594800	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
46	chr11:121594400-121594800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
47	chr11:121594400-121594800	Bivalent Enhancer	Fetal Intestine Large	intestine
48	chr11:121594400-121594800	Enhancers	Fetal Kidney	kidney
49	chr11:121594400-121594800	Enhancers	Fetal Stomach	stomach
50	chr11:121594400-121595000	Enhancers	Breast Myoepithelial Primary Cells	Breast

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