The 2.0 version of rSNPBase

Variant report

Variant rs527606458
Chromosome Location chr10:97287884-97287885
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:97278000-97294000 Weak transcription Esophagus oesophagus
2 chr10:97279200-97290400 Weak transcription H1 Cell Line embryonic stem cell
3 chr10:97279200-97290400 Weak transcription Fetal Muscle Trunk muscle
4 chr10:97279200-97293200 Weak transcription Fetal Lung lung
5 chr10:97279800-97288200 Weak transcription HepG2 liver
6 chr10:97279800-97290600 Weak transcription Fetal Muscle Leg muscle
7 chr10:97280400-97289000 Enhancers Rectal Smooth Muscle rectum
8 chr10:97280600-97291000 Enhancers Colon Smooth Muscle Colon
9 chr10:97280800-97301400 Enhancers Fetal Heart heart
10 chr10:97281600-97289800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr10:97281600-97296400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr10:97281800-97295000 Enhancers Skeletal Muscle Female skeletal muscle
13 chr10:97282200-97304400 Weak transcription Brain Germinal Matrix brain
14 chr10:97282400-97288800 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr10:97282400-97292000 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr10:97282400-97292000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr10:97282800-97288800 Weak transcription HUES6 Cell Line embryonic stem cell
18 chr10:97283000-97292000 Weak transcription HUES48 Cell Line embryonic stem cell
19 chr10:97283200-97296400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr10:97284200-97289000 Weak transcription Fetal Brain Female brain
21 chr10:97284200-97289600 Enhancers Breast Myoepithelial Primary Cells Breast
22 chr10:97284600-97288200 Enhancers Left Ventricle heart
23 chr10:97284600-97289200 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr10:97285000-97289200 Weak transcription Lung lung
25 chr10:97285000-97289400 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr10:97285000-97289600 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr10:97285000-97290000 Weak transcription Brain Substantia Nigra brain
28 chr10:97285200-97289000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr10:97285200-97289200 Weak transcription Brain Angular Gyrus brain
30 chr10:97285200-97292400 Enhancers Fetal Intestine Large intestine
31 chr10:97285800-97288400 Enhancers Psoas Muscle Psoas
32 chr10:97285800-97288600 Enhancers K562 blood
33 chr10:97286000-97288800 Weak transcription Brain Anterior Caudate brain
34 chr10:97286000-97289200 Weak transcription Brain Inferior Temporal Lobe brain
35 chr10:97286000-97290800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr10:97286200-97288800 Weak transcription Right Atrium heart
37 chr10:97286200-97289200 Weak transcription Brain Hippocampus Middle brain
38 chr10:97286200-97289400 Weak transcription Pancreas Pancrea
39 chr10:97286200-97289800 Weak transcription Gastric stomach
40 chr10:97286200-97290400 Weak transcription Spleen Spleen
41 chr10:97286200-97294800 Weak transcription Small Intestine intestine
42 chr10:97286200-97296000 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr10:97286400-97288600 Weak transcription Fetal Intestine Small intestine
44 chr10:97286400-97289000 Weak transcription Duodenum Mucosa Duodenum
45 chr10:97286400-97289000 Weak transcription Right Ventricle heart
46 chr10:97286400-97289200 Weak transcription Stomach Mucosa stomach
47 chr10:97286600-97288800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr10:97286600-97289000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
49 chr10:97286800-97289000 Weak transcription Fetal Stomach stomach
50 chr10:97286800-97293200 Weak transcription Liver Liver

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Last update: Aug 31, 2015