Variant report

Variant	rs527621440
Chromosome Location	chr10:61638670-61638671
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:10)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr10:61633082..61635671-chr10:61637536..61639687,3	MCF-7	breast:
2	chr10:61638398..61641573-chr10:61642787..61646612,4	K562	blood:
3	chr10:61636496..61638711-chr10:61641760..61644230,2	MCF-7	breast:
4	chr10:61636740..61643413-chr10:61643807..61649213,6	K562	blood:
5	chr10:61628363..61632189-chr10:61637394..61643761,6	K562	blood:
6	chr10:61634142..61636332-chr10:61636728..61639636,2	MCF-7	breast:
7	chr10:61633677..61637740-chr10:61638115..61642166,4	K562	blood:
8	chr10:61635533..61637804-chr10:61638300..61641205,3	K562	blood:
9	chr10:61630214..61632918-chr10:61637567..61639312,2	MCF-7	breast:
10	chr10:61615566..61617712-chr10:61637129..61639962,2	MCF-7	breast:

No data

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1795420	chr10:61637271-61669227	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:99 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:61583200-61640600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:61624800-61641000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr10:61625000-61638800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
4	chr10:61625000-61655400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr10:61625200-61639200	Weak transcription	Primary hematopoietic stem cells	blood
6	chr10:61630000-61647800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr10:61633000-61639200	Weak transcription	Spleen	Spleen
8	chr10:61633000-61640600	Weak transcription	Gastric	stomach
9	chr10:61633200-61639400	Weak transcription	Primary T cells fromperipheralblood	blood
10	chr10:61633200-61640600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
11	chr10:61633200-61641800	Weak transcription	Lung	lung
12	chr10:61633400-61638800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
13	chr10:61633400-61639400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr10:61633400-61643200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr10:61633400-61645200	Weak transcription	Fetal Thymus	thymus
16	chr10:61633400-61647800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
17	chr10:61633400-61647800	Weak transcription	Fetal Muscle Leg	muscle
18	chr10:61633400-61647800	Weak transcription	Fetal Stomach	stomach
19	chr10:61633400-61648600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
20	chr10:61633600-61645200	Weak transcription	Brain Germinal Matrix	brain
21	chr10:61634000-61640400	Weak transcription	Duodenum Mucosa	Duodenum
22	chr10:61634000-61645000	Weak transcription	Stomach Smooth Muscle	stomach
23	chr10:61634000-61645600	Weak transcription	Fetal Lung	lung
24	chr10:61634000-61646800	Weak transcription	Adipose Nuclei	Adipose
25	chr10:61634400-61640200	Enhancers	Colon Smooth Muscle	Colon
26	chr10:61634400-61648800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
27	chr10:61634400-61649000	Weak transcription	Cortex derived primary cultured neurospheres	brain
28	chr10:61634400-61651200	Weak transcription	Rectal Mucosa Donor 31	rectum
29	chr10:61634600-61638800	Weak transcription	Pancreas	Pancrea
30	chr10:61634600-61640600	Weak transcription	Left Ventricle	heart
31	chr10:61634800-61640600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
32	chr10:61634800-61645200	Weak transcription	Brain Cingulate Gyrus	brain
33	chr10:61635000-61644000	Weak transcription	Brain Angular Gyrus	brain
34	chr10:61635000-61645400	Weak transcription	Brain Substantia Nigra	brain
35	chr10:61635000-61646800	Weak transcription	Right Ventricle	heart
36	chr10:61635400-61640800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
37	chr10:61635600-61639600	Weak transcription	HepG2	liver
38	chr10:61635600-61640600	Weak transcription	H1 Cell Line	embryonic stem cell
39	chr10:61635600-61640600	Weak transcription	H9 Cell Line	embryonic stem cell
40	chr10:61635600-61640800	Weak transcription	HUES48 Cell Line	embryonic stem cell
41	chr10:61635600-61640800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
42	chr10:61635600-61647600	Weak transcription	Brain Anterior Caudate	brain
43	chr10:61635800-61640800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
44	chr10:61635800-61641000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
45	chr10:61635800-61648600	Enhancers	Primary B cells from peripheral blood	blood
46	chr10:61636200-61641800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
47	chr10:61636600-61639800	Enhancers	Breast Myoepithelial Primary Cells	Breast
48	chr10:61636600-61641800	Enhancers	Primary T helper cells PMA-I stimulated	--
49	chr10:61636800-61640600	Weak transcription	Fetal Intestine Small	intestine
50	chr10:61637000-61639000	Enhancers	Skeletal Muscle Female	skeletal muscle

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