The 2.0 version of rSNPBase

Variant report

Variant rs527679020
Chromosome Location chr12:42512104-42512105
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:42471800-42524400 Weak transcription Esophagus oesophagus
2 chr12:42474600-42514400 Weak transcription Fetal Muscle Trunk muscle
3 chr12:42474600-42518800 Weak transcription Brain Anterior Caudate brain
4 chr12:42476000-42524400 Weak transcription Gastric stomach
5 chr12:42476200-42524400 Weak transcription Pancreas Pancrea
6 chr12:42476600-42523800 Weak transcription Hela-S3 cervix
7 chr12:42484400-42524800 Weak transcription Right Ventricle heart
8 chr12:42485800-42512200 Weak transcription Brain Angular Gyrus brain
9 chr12:42486000-42513000 Weak transcription Aorta Aorta
10 chr12:42488600-42518600 Weak transcription Fetal Brain Male brain
11 chr12:42492200-42512400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr12:42492200-42518600 Weak transcription K562 blood
13 chr12:42492400-42512200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr12:42492400-42512200 Weak transcription HUVEC blood vessel
15 chr12:42493000-42524400 Weak transcription Brain Substantia Nigra brain
16 chr12:42493000-42534400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr12:42493200-42518400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr12:42493200-42519200 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr12:42497200-42518800 Weak transcription Psoas Muscle Psoas
20 chr12:42498800-42513000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr12:42499000-42516800 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr12:42499200-42512200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr12:42499400-42518800 Weak transcription Fetal Kidney kidney
24 chr12:42501000-42518800 Weak transcription Colon Smooth Muscle Colon
25 chr12:42501200-42512200 Weak transcription Muscle Satellite Cultured Cells --
26 chr12:42504800-42514600 Weak transcription Spleen Spleen
27 chr12:42505600-42516800 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr12:42505800-42512200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr12:42505800-42515200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr12:42505800-42518400 Weak transcription Fetal Intestine Small intestine
31 chr12:42505800-42518800 Weak transcription H1 Cell Line embryonic stem cell
32 chr12:42505800-42518800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr12:42505800-42518800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr12:42505800-42522400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr12:42505800-42537000 Weak transcription Fetal Stomach stomach
36 chr12:42505800-42537000 Weak transcription Lung lung
37 chr12:42507400-42515200 Weak transcription Placenta Amnion Placenta Amnion
38 chr12:42508400-42524600 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr12:42508800-42517000 Weak transcription HUES48 Cell Line embryonic stem cell
40 chr12:42509600-42512200 Weak transcription NH-A brain
41 chr12:42509600-42519400 Weak transcription Fetal Muscle Leg muscle
42 chr12:42509800-42513600 Weak transcription Colonic Mucosa Colon
43 chr12:42509800-42518600 Weak transcription H9 Cell Line embryonic stem cell
44 chr12:42509800-42518800 Weak transcription Brain Germinal Matrix brain
45 chr12:42510000-42518800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr12:42510600-42512200 Weak transcription NHLF lung
47 chr12:42510800-42514000 Weak transcription Fetal Thymus thymus
48 chr12:42511000-42512800 Strong transcription Primary monocytes fromperipheralblood blood
49 chr12:42511000-42518800 Weak transcription Brain Inferior Temporal Lobe brain
50 chr12:42511200-42512200 Strong transcription A549 lung

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Last update: Aug 31, 2015