The 2.0 version of rSNPBase

Variant report

Variant rs527684781
Chromosome Location chr13:30801334-30801335
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30765600-30807000 Weak transcription Gastric stomach
2 chr13:30766400-30804400 Weak transcription Duodenum Mucosa Duodenum
3 chr13:30770600-30803200 Weak transcription HUES48 Cell Line embryonic stem cell
4 chr13:30774400-30812600 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr13:30774600-30802800 Weak transcription Lung lung
6 chr13:30774600-30805200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr13:30775000-30803000 Weak transcription Esophagus oesophagus
8 chr13:30790000-30807000 Weak transcription Small Intestine intestine
9 chr13:30791000-30802600 Weak transcription Brain Cingulate Gyrus brain
10 chr13:30791000-30802600 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr13:30791000-30807200 Weak transcription H9 Cell Line embryonic stem cell
12 chr13:30791000-30808800 Weak transcription Brain Hippocampus Middle brain
13 chr13:30791000-30811600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr13:30791000-30831400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr13:30792400-30802600 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr13:30795800-30805600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr13:30796400-30801600 ZNF genes & repeats Dnd41 blood
18 chr13:30796600-30807000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr13:30796600-30808600 Weak transcription Brain Substantia Nigra brain
20 chr13:30796800-30802800 Weak transcription Fetal Intestine Large intestine
21 chr13:30796800-30802800 Weak transcription K562 blood
22 chr13:30796800-30831400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr13:30797000-30808600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr13:30797000-30823400 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr13:30797200-30802800 Weak transcription Fetal Intestine Small intestine
26 chr13:30797400-30802800 Weak transcription Fetal Stomach stomach
27 chr13:30797800-30814800 Weak transcription Placenta Placenta
28 chr13:30798800-30803400 Strong transcription Muscle Satellite Cultured Cells --
29 chr13:30798800-30804400 Weak transcription Primary monocytes fromperipheralblood blood
30 chr13:30798800-30810800 Strong transcription Fetal Thymus thymus
31 chr13:30799000-30805600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr13:30799200-30802800 Weak transcription Rectal Smooth Muscle rectum
33 chr13:30799200-30804000 Weak transcription iPS-18 Cell Line embryonic stem cell
34 chr13:30799200-30805600 Strong transcription Breast Myoepithelial Primary Cells Breast
35 chr13:30799200-30805600 Strong transcription Primary T regulatory cells fromperipheralblood blood
36 chr13:30799200-30805600 Strong transcription Liver Liver
37 chr13:30799200-30805600 Strong transcription Monocytes-CD14+_RO01746 blood
38 chr13:30799200-30811800 Weak transcription H1 Cell Line embryonic stem cell
39 chr13:30799200-30831400 Weak transcription Aorta Aorta
40 chr13:30799400-30801800 Strong transcription Primary hematopoietic stem cells short term culture blood
41 chr13:30799400-30802400 Weak transcription Brain Germinal Matrix brain
42 chr13:30799400-30802800 Weak transcription Left Ventricle heart
43 chr13:30799400-30803000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr13:30799400-30803000 Weak transcription Fetal Heart heart
45 chr13:30799400-30803200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr13:30799400-30803200 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr13:30799400-30804000 Weak transcription Primary T cells fromperipheralblood blood
48 chr13:30799400-30804800 Strong transcription Duodenum Smooth Muscle Duodenum
49 chr13:30799400-30805400 Weak transcription ES-I3 Cell Line embryonic stem cell
50 chr13:30799400-30805600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015