Variant report

Variant	rs527813696
Chromosome Location	chr9:13689552-13689553
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023684	chr9:13529680-13744602	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv540067	chr9:13529680-13744602	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv892587	chr9:13601074-13732363	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	esv1843958	chr9:13631992-13706651	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv892588	chr9:13667639-13715063	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
6	nsv1018933	chr9:13669862-13756710	Enhancers Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
7	nsv892589	chr9:13689066-13715328	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
8	nsv892590	chr9:13689066-13777299	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:13687600-13689600	Enhancers	HMEC	breast
2	chr9:13687800-13690000	Enhancers	Skeletal Muscle Female	skeletal muscle
3	chr9:13687800-13690200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr9:13688200-13689800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr9:13688200-13690000	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr9:13688400-13689600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr9:13688400-13689600	Enhancers	Colon Smooth Muscle	Colon
8	chr9:13688600-13690000	Enhancers	HSMMtube	muscle
9	chr9:13688600-13690200	Enhancers	Fetal Muscle Leg	muscle
10	chr9:13688600-13690200	Enhancers	Skeletal Muscle Male	skeletal muscle
11	chr9:13689000-13689600	Enhancers	Adipose Nuclei	Adipose
12	chr9:13689000-13689800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr9:13689000-13689800	Enhancers	iPS-20b Cell Line	embryonic stem cell
14	chr9:13689000-13689800	Weak transcription	Right Ventricle	heart
15	chr9:13689000-13691000	Weak transcription	NHEK	skin
16	chr9:13689000-13695000	Weak transcription	Aorta	Aorta
17	chr9:13689200-13689800	Weak transcription	Psoas Muscle	Psoas
18	chr9:13689200-13690000	Weak transcription	HSMM	muscle

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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