The 2.0 version of rSNPBase

Variant report

Variant rs527849410
Chromosome Location chr10:18630154-18630155
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:18629200-18630200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
2 chr10:18629200-18630200 Active TSS Colon Smooth Muscle Colon
3 chr10:18629200-18630400 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
4 chr10:18629200-18630400 Active TSS Aorta Aorta
5 chr10:18629400-18630200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
6 chr10:18629400-18630200 Active TSS Brain Angular Gyrus brain
7 chr10:18629400-18630200 Active TSS Duodenum Mucosa Duodenum
8 chr10:18629400-18630200 Active TSS Duodenum Smooth Muscle Duodenum
9 chr10:18629400-18630200 Active TSS Fetal Kidney kidney
10 chr10:18629400-18630200 Active TSS Fetal Stomach stomach
11 chr10:18629400-18630200 Active TSS Rectal Smooth Muscle rectum
12 chr10:18629400-18630200 Flanking Active TSS NH-A brain
13 chr10:18629400-18630200 Active TSS NHDF-Ad bronchial
14 chr10:18629400-18630400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr10:18629400-18630400 Flanking Active TSS Cortex derived primary cultured neurospheres brain
16 chr10:18629400-18630400 Active TSS Brain Inferior Temporal Lobe brain
17 chr10:18629400-18630400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
18 chr10:18629400-18630400 Active TSS Rectal Mucosa Donor 29 rectum
19 chr10:18629400-18630400 Active TSS Stomach Smooth Muscle stomach
20 chr10:18629400-18631600 Active TSS Left Ventricle heart
21 chr10:18629400-18632600 Active TSS Right Atrium heart
22 chr10:18629400-18632800 Active TSS Right Ventricle heart
23 chr10:18629600-18630200 Active TSS Brain Anterior Caudate brain
24 chr10:18629600-18630200 Active TSS Fetal Muscle Leg muscle
25 chr10:18629600-18630200 Active TSS Fetal Thymus thymus
26 chr10:18629600-18630400 Flanking Active TSS Brain Cingulate Gyrus brain
27 chr10:18629600-18630600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
28 chr10:18629600-18633000 Active TSS Fetal Heart heart
29 chr10:18629800-18630200 Flanking Active TSS Brain Hippocampus Middle brain
30 chr10:18629800-18630200 Active TSS Osteobl bone
31 chr10:18629800-18630400 Enhancers Fetal Brain Male brain
32 chr10:18629800-18630400 Flanking Active TSS Pancreatic Islets Pancreatic Islet
33 chr10:18630000-18630200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr10:18630000-18630200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr10:18630000-18630200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr10:18630000-18630200 Active TSS Adipose Nuclei Adipose
37 chr10:18630000-18630200 Enhancers Brain Germinal Matrix brain
38 chr10:18630000-18630200 Active TSS Fetal Brain Female brain
39 chr10:18630000-18630200 Active TSS Fetal Lung lung
40 chr10:18630000-18630200 Active TSS Ovary ovary
41 chr10:18630000-18630200 Flanking Active TSS NHLF lung
42 chr10:18630000-18633800 Weak transcription Liver Liver
43 chr10:18630000-18639200 Weak transcription Pancreas Pancrea

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Last update: Aug 31, 2015