Variant report

Variant	rs527998974
Chromosome Location	chr8:60441638-60441639
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029441	chr8:60099776-60539141	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv539629	chr8:60099776-60539141	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv831330	chr8:60270398-60514078	Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv6215	chr8:60440190-60484139	Flanking Active TSS Active TSS Weak transcription Enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:60441200-60442000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
2	chr8:60441200-60442400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr8:60441200-60442600	Enhancers	Fetal Stomach	stomach
4	chr8:60441400-60441800	Enhancers	Ovary	ovary
5	chr8:60441400-60442000	Flanking Active TSS	Stomach Smooth Muscle	stomach
6	chr8:60441400-60443200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr8:60441600-60441800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr8:60441600-60441800	Enhancers	Colonic Mucosa	Colon
9	chr8:60441600-60441800	Enhancers	Duodenum Mucosa	Duodenum
10	chr8:60441600-60441800	Active TSS	Rectal Mucosa Donor 29	rectum
11	chr8:60441600-60442000	Flanking Active TSS	Fetal Intestine Large	intestine
12	chr8:60441600-60442000	Flanking Active TSS	Fetal Intestine Small	intestine
13	chr8:60441600-60442000	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
14	chr8:60441600-60442600	Active TSS	Duodenum Smooth Muscle	Duodenum
15	chr8:60441600-60443000	Active TSS	Rectal Smooth Muscle	rectum
16	chr8:60441600-60444600	Active TSS	Colon Smooth Muscle	Colon

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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