Variant report

Variant	rs528285243
Chromosome Location	chr14:67981181-67981182
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:67980933..67983898-chr14:67998089..68001326,3	MCF-7	breast:
2	chr14:67954053..67956925-chr14:67980005..67982672,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000054690	Chromatin interaction
ENSG00000198133	Chromatin interaction

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv456331	chr14:67732861-68103780	Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
2	nsv564961	chr14:67732861-68103780	Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Strong transcription Enhancers Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
3	nsv470651	chr14:67732861-68113293	Active TSS Strong transcription Flanking Active TSS Weak transcription Genic enhancers Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
4	nsv902066	chr14:67873128-68103780	Flanking Active TSS Enhancers Active TSS Weak transcription Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
5	nsv1320	chr14:67938724-67984157	Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription Weak transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
6	esv3357417	chr14:67980624-67983572	Flanking Active TSS Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:97 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:67978200-67981200	Weak transcription	Hela-S3	cervix
2	chr14:67979000-67981200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr14:67979400-67981200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
4	chr14:67979400-67981400	Enhancers	Spleen	Spleen
5	chr14:67979400-67981400	Enhancers	GM12878-XiMat	blood
6	chr14:67979600-67981200	Enhancers	Primary T killer memory cells from peripheral blood	blood
7	chr14:67979800-67981200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
8	chr14:67979800-67982600	Enhancers	Fetal Brain Male	brain
9	chr14:67980000-67981200	Enhancers	Primary T helper cells PMA-I stimulated	--
10	chr14:67980200-67981400	Flanking Active TSS	Fetal Intestine Small	intestine
11	chr14:67980200-67981400	Enhancers	Small Intestine	intestine
12	chr14:67980200-67981600	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
13	chr14:67980400-67981200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
14	chr14:67980400-67981200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
15	chr14:67980400-67981400	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
16	chr14:67980400-67981400	Flanking Active TSS	Brain Angular Gyrus	brain
17	chr14:67980400-67981400	Flanking Active TSS	Brain Cingulate Gyrus	brain
18	chr14:67980400-67981400	Flanking Active TSS	Duodenum Mucosa	Duodenum
19	chr14:67980400-67981400	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
20	chr14:67980400-67981600	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
21	chr14:67980600-67981200	Enhancers	Primary monocytes fromperipheralblood	blood
22	chr14:67980600-67981200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
23	chr14:67980600-67981200	Enhancers	Fetal Thymus	thymus
24	chr14:67980600-67981400	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
25	chr14:67980600-67981400	Flanking Active TSS	Fetal Brain Female	brain
26	chr14:67980600-67981400	Enhancers	Fetal Lung	lung
27	chr14:67980600-67981400	Flanking Bivalent TSS/Enh	HepG2	liver
28	chr14:67980600-67981600	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
29	chr14:67980600-67982600	Active TSS	Pancreatic Islets	Pancreatic Islet
30	chr14:67980800-67981200	Enhancers	Primary T cells from cord blood	blood
31	chr14:67980800-67981200	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
32	chr14:67980800-67981200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
33	chr14:67980800-67981200	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
34	chr14:67980800-67981200	Enhancers	Liver	Liver
35	chr14:67980800-67981200	Flanking Active TSS	Colon Smooth Muscle	Colon
36	chr14:67980800-67981200	Enhancers	Left Ventricle	heart
37	chr14:67980800-67981200	Enhancers	A549	lung
38	chr14:67980800-67981200	Enhancers	NHEK	skin
39	chr14:67980800-67981400	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
40	chr14:67980800-67981400	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
41	chr14:67980800-67981400	Flanking Active TSS	Brain Hippocampus Middle	brain
42	chr14:67980800-67981400	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
43	chr14:67980800-67981400	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
44	chr14:67980800-67981400	Flanking Active TSS	Stomach Mucosa	stomach
45	chr14:67980800-67981400	Flanking Active TSS	Stomach Smooth Muscle	stomach
46	chr14:67980800-67981600	Flanking Bivalent TSS/Enh	iPS DF 19.11 Cell Line	embryonic stem cell
47	chr14:67980800-67981600	Flanking Active TSS	Primary B cells from peripheral blood	blood
48	chr14:67980800-67981600	Flanking Active TSS	Brain Germinal Matrix	brain
49	chr14:67980800-67981600	Flanking Active TSS	Placenta	Placenta
50	chr14:67980800-67981600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood

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