Variant report

Variant	rs528288535
Chromosome Location	chr12:63078985-63078986
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:63077508..63079234-chr12:63080759..63082975,2	MCF-7	breast:
2	chr12:63077645..63079801-chr12:63080578..63082441,2	K562	blood:

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv527742	chr12:63078183-63084312	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:73 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:63067400-63116800	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr12:63068800-63102800	Weak transcription	Right Ventricle	heart
3	chr12:63069400-63096600	Weak transcription	Fetal Kidney	kidney
4	chr12:63071400-63083200	Weak transcription	Gastric	stomach
5	chr12:63071400-63087000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr12:63071600-63079000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr12:63071600-63079800	Weak transcription	Fetal Intestine Large	intestine
8	chr12:63071600-63087000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr12:63071600-63096400	Weak transcription	Left Ventricle	heart
10	chr12:63072000-63082000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
11	chr12:63072000-63082400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
12	chr12:63072000-63089200	Weak transcription	Primary hematopoietic stem cells	blood
13	chr12:63072400-63079000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr12:63074000-63086200	Weak transcription	Primary monocytes fromperipheralblood	blood
15	chr12:63074200-63092000	Strong transcription	HepG2	liver
16	chr12:63074600-63096400	Weak transcription	Pancreas	Pancrea
17	chr12:63075600-63081400	Enhancers	Breast Myoepithelial Primary Cells	Breast
18	chr12:63076200-63081200	Enhancers	Fetal Muscle Leg	muscle
19	chr12:63076200-63081400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr12:63077000-63079200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
21	chr12:63077000-63079400	Enhancers	HUES6 Cell Line	embryonic stem cell
22	chr12:63077000-63079400	Enhancers	Fetal Stomach	stomach
23	chr12:63077000-63079400	Enhancers	NHLF	lung
24	chr12:63077200-63079200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
25	chr12:63077200-63079200	Enhancers	Brain Hippocampus Middle	brain
26	chr12:63077200-63079200	Enhancers	Brain Substantia Nigra	brain
27	chr12:63077200-63079200	Enhancers	Colon Smooth Muscle	Colon
28	chr12:63077200-63079400	Enhancers	Osteobl	bone
29	chr12:63077400-63079200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
30	chr12:63077400-63079200	Enhancers	Brain Anterior Caudate	brain
31	chr12:63077400-63079200	Enhancers	Brain Cingulate Gyrus	brain
32	chr12:63077400-63079200	Enhancers	Brain Inferior Temporal Lobe	brain
33	chr12:63077400-63079400	Enhancers	H1 Cell Line	embryonic stem cell
34	chr12:63077400-63079400	Enhancers	iPS-20b Cell Line	embryonic stem cell
35	chr12:63077400-63079400	Enhancers	Fetal Lung	lung
36	chr12:63077400-63079600	Enhancers	HUES64 Cell Line	embryonic stem cell
37	chr12:63077400-63080200	Enhancers	iPS-18 Cell Line	embryonic stem cell
38	chr12:63077600-63079000	Enhancers	H9 Cell Line	embryonic stem cell
39	chr12:63077600-63079200	Enhancers	ES-I3 Cell Line	embryonic stem cell
40	chr12:63077600-63079200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
41	chr12:63077600-63079200	Enhancers	HUES48 Cell Line	embryonic stem cell
42	chr12:63077600-63079200	Enhancers	iPS-15b Cell Line	embryonic stem cell
43	chr12:63077800-63080600	Weak transcription	Fetal Intestine Small	intestine
44	chr12:63077800-63086600	Weak transcription	Skeletal Muscle Male	skeletal muscle
45	chr12:63077800-63095400	Weak transcription	Placenta	Placenta
46	chr12:63078000-63081000	Weak transcription	HSMMtube	muscle
47	chr12:63078000-63118600	Weak transcription	Duodenum Mucosa	Duodenum
48	chr12:63078200-63079000	Enhancers	Aorta	Aorta
49	chr12:63078200-63081000	Weak transcription	Fetal Muscle Trunk	muscle
50	chr12:63078200-63082600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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