Variant report

Variant	rs528465171
Chromosome Location	chr4:1240093-1240094
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:28)
CpG islands
(count:61)
Chromatin interactive
region (count:29)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:28 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr4:1239447-1245326	K562	blood:	n/a	n/a
2	POLR2A	chr4:1239857-1240439	GM12891	blood:	n/a	n/a
3	POLR2A	chr4:1239996-1240476	GM12878	blood:	n/a	n/a
4	CTCF	chr4:1240020-1240170	HRE	kidney:	n/a	chr4:1240138-1240156 chr4:1240060-1240073 chr4:1240041-1240062 chr4:1240039-1240057 chr4:1240042-1240051
5	RAD21	chr4:1239952-1240250	H1-hESC	embryonic stem cell:	n/a	chr4:1240040-1240059 chr4:1240216-1240228 chr4:1240136-1240155
6	POLR2A	chr4:1238918-1244163	GM12878	blood:	n/a	n/a
7	POLR2A	chr4:1239852-1245445	GM12892	blood:	n/a	n/a
8	POLR2A	chr4:1239738-1242639	GM12878	blood:	n/a	n/a
9	POLR2A	chr4:1239867-1245313	HepG2	liver:	n/a	n/a
10	POLR2A	chr4:1239883-1240558	GM12878	blood:	n/a	n/a
11	POLR2A	chr4:1238878-1245469	GM12878	blood:	n/a	n/a
12	HEY1	chr4:1240019-1240515	K562	blood:	n/a	n/a
13	WRNIP1	chr4:1239911-1241478	GM12878	blood:	n/a	n/a
14	POLR2A	chr4:1239998-1245234	Raji	blood:	n/a	n/a
15	CTCF	chr4:1240000-1240150	AG09309	skin:	n/a	chr4:1240060-1240073 chr4:1240041-1240062 chr4:1240039-1240057 chr4:1240042-1240051
16	POLR2A	chr4:1239874-1244526	GM19193	blood:	n/a	n/a
17	CTCF	chr4:1239960-1240110	GM12871	blood:	n/a	chr4:1240060-1240073 chr4:1240041-1240062 chr4:1240039-1240057 chr4:1240042-1240051
18	POLR2A	chr4:1240056-1240548	GM12891	blood:	n/a	n/a
19	POLR2A	chr4:1239891-1245200	K562	blood:	n/a	n/a
20	POLR2A	chr4:1239926-1242561	SK-N-MC	brain:	n/a	n/a
21	POLR2A	chr4:1239528-1240460	HepG2	liver:	n/a	n/a
22	POLR2A	chr4:1239896-1243964	GM18526	blood:	n/a	n/a
23	POLR2A	chr4:1239667-1240486	HepG2	liver:	n/a	n/a
24	RAD21	chr4:1239942-1240132	H1-hESC	embryonic stem cell:	n/a	chr4:1240040-1240059 chr4:1239945-1239957
25	POLR2A	chr4:1239940-1240582	ECC-1	luminal epithelium:	n/a	n/a
26	POLR2A	chr4:1239725-1241542	GM12892	blood:	n/a	n/a
27	POLR2A	chr4:1239817-1245060	GM12878	blood:	n/a	n/a
28	CTCF	chr4:1240040-1240190	HBMEC	blood vessel:	n/a	chr4:1240138-1240156 chr4:1240060-1240073 chr4:1240041-1240062 chr4:1240042-1240051

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:1240068-1240118	AG09309	skin:	n/a
2	chr4:1240068-1240118	GM06990	blood:	n/a
3	chr4:1240068-1240118	A549	lung:	n/a
4	chr4:1240068-1240118	SKMC	muscle:	n/a
5	chr4:1240068-1240118	AG09319	gingival:	n/a
6	chr4:1240068-1240118	BE2_C	brain:	n/a
7	chr4:1240068-1240118	PFSK-1	brain:	n/a
8	chr4:1240068-1240118	SK-N-SH	brain:	n/a
9	chr4:1240068-1240118	NHDF-neo	bronchial:	n/a
10	chr4:1240068-1240118	BJ	skin:	n/a
11	chr4:1240068-1240118	NT2-D1	testis:	n/a
12	chr4:1240068-1240118	NB4	blood:	n/a
13	chr4:1240068-1240118	AG10803	skin:	n/a
14	chr4:1240068-1240118	AG04450	lung:	fetal
15	chr4:1240068-1240118	HAEpiC	amniotic membrane:	n/a
16	chr4:1240068-1240118	T-47D	breast:	n/a
17	chr4:1240068-1240118	AoSMC	blood vessel:	n/a
18	chr4:1240068-1240118	GM12878	blood:	n/a
19	chr4:1240068-1240118	ProgFib	skin:	n/a
20	chr4:1240068-1240118	SK-N-MC	brain:	n/a
21	chr4:1240068-1240118	HEEpiC	esophagus:	n/a
22	chr4:1240068-1240118	HRPEpiC	eye:	n/a
23	chr4:1240068-1240118	U87	brain:	n/a
24	chr4:1240068-1240118	PrEC	prostate:	n/a
25	chr4:1240068-1240118	GM12892	blood:	n/a
26	chr4:1240068-1240118	IMR90	lung:	fetal
27	chr4:1240068-1240118	GM12891	blood:	n/a
28	chr4:1240068-1240118	ovcar-3	ovarian:	n/a
29	chr4:1240068-1240118	HRCEpiC	kidney:	n/a
30	chr4:1240068-1240118	Jurkat	blood:	n/a
31	chr4:1240068-1240118	MCF10A-Er-Src	breast:	n/a
32	chr4:1240068-1240118	Hela-S3	cervix:	n/a
33	chr4:1240068-1240118	GM19239	blood:	n/a
34	chr4:1240068-1240118	Hepatocyte	liver:	n/a
35	chr4:1240068-1240118	ECC-1	luminal epithelium:	n/a
36	chr4:1240068-1240118	HCM	heart:	n/a
37	chr4:1240068-1240118	K562	blood:	n/a
38	chr4:1240068-1240118	SK-N-SH_RA	brain:	n/a
39	chr4:1240068-1240118	HCF	heart:	n/a
40	chr4:1240068-1240118	HIPEpiC	eye:	n/a
41	chr4:1240068-1240118	LNCaP	prostate:	n/a
42	chr4:1240068-1240118	Caco-2	colon:	n/a
43	chr4:1240068-1240118	HEK293	kidney:	embryo
44	chr4:1240068-1240118	NH-A	brain:	n/a
45	chr4:1240068-1240118	CMK	blood:	n/a
46	chr4:1240068-1240118	HRE	kidney:	n/a
47	chr4:1240068-1240118	HCPEpiC	choroid plexus:	n/a
48	chr4:1240068-1240118	NHBE	bronchial:	n/a
49	chr4:1240068-1240118	RPTEC	kidney:	n/a
50	chr4:1240068-1240118	PANC-1	pancreas:	n/a

(count:29 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr4:1128219..1129832-chr4:1239417..1241300,2	MCF-7	breast:
2	chr4:1215555..1220351-chr4:1239288..1242893,7	K562	blood:
3	chr17:57915852..57918679-chr4:1239651..1241849,2	MCF-7	breast:
4	chr4:925435..927433-chr4:1239888..1241441,2	MCF-7	breast:
5	chr4:1207048..1210414-chr4:1237792..1241348,3	K562	blood:
6	chr4:1201438..1204113-chr4:1239051..1243365,5	MCF-7	breast:
7	chr4:1158166..1163360-chr4:1238498..1245354,13	MCF-7	breast:
8	chr20:58514614..58517164-chr4:1239495..1242214,2	MCF-7	breast:
9	chr4:1236833..1250005-chr4:1276188..1292579,54	MCF-7	breast:
10	chr4:1236808..1249320-chr4:1336333..1343819,66	MCF-7	breast:
11	chr4:1238103..1240544-chr4:1359472..1361633,2	MCF-7	breast:
12	chr4:1013317..1015069-chr4:1239149..1240689,2	K562	blood:
13	chr4:1238327..1240234-chr4:1330043..1332552,2	MCF-7	breast:
14	chr4:1238043..1241970-chr4:1281719..1285287,6	MCF-7	breast:
15	chr4:1051885..1054795-chr4:1239634..1242106,2	MCF-7	breast:
16	chr4:1235141..1249133-chr4:1336906..1347308,118	MCF-7	breast:
17	chr4:1003725..1006599-chr4:1238644..1243840,5	MCF-7	breast:
18	chr4:1239502..1245378-chr4:1336996..1344860,21	K562	blood:
19	chr4:1239325..1241522-chr4:1343447..1345640,2	K562	blood:
20	chr4:990681..994690-chr4:1238010..1243594,6	MCF-7	breast:
21	chr4:1189059..1190794-chr4:1239654..1242349,2	K562	blood:
22	chr1:151817465..151820219-chr4:1240046..1241546,2	MCF-7	breast:
23	chr4:1020274..1022764-chr4:1238213..1242920,4	MCF-7	breast:
24	chr4:1204863..1206646-chr4:1239464..1241348,2	K562	blood:
25	chr4:1184548..1187736-chr4:1238018..1240467,3	MCF-7	breast:
26	chr4:1121885..1124644-chr4:1239644..1241550,2	MCF-7	breast:
27	chr4:1238004..1248980-chr4:1275065..1286840,30	K562	blood:
28	chr4:1238004..1246805-chr4:1279798..1288475,25	K562	blood:
29	chr4:1209959..1212251-chr4:1238476..1240905,2	MCF-7	breast:

No data

Variant related genes	Relation type
CTBP1	TF binding region
CTBP1-AS2	TF binding region
CTBP1	CpG island
CTBP1-AS2	CpG island
ENSG00000250259	Chromatin interaction
ENSG00000178222	Chromatin interaction
ENSG00000132825	Chromatin interaction
ENSG00000159692	Chromatin interaction
ENSG00000159674	Chromatin interaction
ENSG00000127419	Chromatin interaction
ENSG00000127418	Chromatin interaction
ENSG00000178950	Chromatin interaction
ENSG00000199004	Chromatin interaction
ENSG00000163945	Chromatin interaction
ENSG00000273179	Chromatin interaction
ENSG00000090316	Chromatin interaction
ENSG00000127415	Chromatin interaction
ENSG00000196227	Chromatin interaction

Extended variants
information (count: 36 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:36 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv822425	chr4:540105-1413799	Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	108 gene(s)	inside rSNPs	diseases
2	nsv530490	chr4:614355-1399150	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
3	esv3339080	chr4:970630-1546223	Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
4	nsv829835	chr4:1097586-1304239	Enhancers Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	59 gene(s)	inside rSNPs	diseases
5	nsv878328	chr4:1141573-1990425	Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	121 gene(s)	inside rSNPs	diseases
6	nsv878329	chr4:1147407-1254930	Genic enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
7	nsv878330	chr4:1147407-1523930	Strong transcription Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	71 gene(s)	inside rSNPs	diseases
8	nsv878331	chr4:1159680-1254930	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
9	nsv461152	chr4:1159680-1415698	Enhancers Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
10	nsv593278	chr4:1159680-1415698	Enhancers Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
11	nsv461153	chr4:1174861-1254930	Genic enhancers Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
12	nsv593279	chr4:1174861-1254930	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
13	nsv461154	chr4:1179213-1254930	Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Genic enhancers Active TSS Strong transcription Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
14	nsv593280	chr4:1179213-1254930	Flanking Active TSS Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
15	nsv878332	chr4:1179213-1254930	Genic enhancers Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
16	nsv997971	chr4:1191256-1518521	Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
17	nsv878333	chr4:1193832-1254930	Enhancers Flanking Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
18	nsv461155	chr4:1203265-1352685	Enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
19	nsv593281	chr4:1203265-1352685	Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
20	nsv1002097	chr4:1212573-1320086	Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
21	nsv536986	chr4:1212573-1320086	Genic enhancers Enhancers Flanking Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
22	esv1811773	chr4:1228251-1287474	ZNF genes & repeats Strong transcription Weak transcription Transcr. at gene 5' and 3' Enhancers Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
23	esv1800629	chr4:1228451-1287274	Weak transcription Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
24	esv1812851	chr4:1228451-1287274	Strong transcription Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
25	esv1823612	chr4:1228451-1287274	Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
26	esv1825633	chr4:1228451-1287274	Enhancers Flanking Active TSS Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
27	esv1844406	chr4:1230397-1243775	Flanking Active TSS Strong transcription Weak transcription Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
28	esv1836927	chr4:1231363-1244037	Flanking Active TSS Strong transcription Active TSS Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
29	esv1838677	chr4:1231540-1274734	Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
30	nsv822433	chr4:1232688-1246206	Enhancers ZNF genes & repeats Weak transcription Strong transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
31	nsv878334	chr4:1232910-1254930	Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
32	esv1839490	chr4:1237014-1254930	Active TSS Enhancers Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
33	nsv878335	chr4:1237014-1254930	ZNF genes & repeats Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
34	nsv593282	chr4:1238363-1243573	Strong transcription Enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
35	nsv878336	chr4:1238859-1254930	Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
36	nsv878337	chr4:1240091-1254930	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Genic enhancers Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:1219000-1240200	Weak transcription	Hela-S3	cervix
2	chr4:1221600-1240200	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr4:1222000-1240800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr4:1225000-1240200	Weak transcription	K562	blood
5	chr4:1229200-1240400	Weak transcription	Fetal Kidney	kidney
6	chr4:1230000-1240400	Weak transcription	HSMMtube	muscle
7	chr4:1233400-1240600	Genic enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr4:1234600-1240400	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr4:1234600-1240800	Genic enhancers	Spleen	Spleen
10	chr4:1235000-1240800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr4:1235000-1241200	Weak transcription	Aorta	Aorta
12	chr4:1235200-1240200	Enhancers	Rectal Mucosa Donor 31	rectum
13	chr4:1235200-1240400	Enhancers	Liver	Liver
14	chr4:1235200-1240800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
15	chr4:1235400-1240200	Weak transcription	H9 Cell Line	embryonic stem cell
16	chr4:1235400-1240200	Enhancers	Left Ventricle	heart
17	chr4:1235400-1240600	Weak transcription	HUES64 Cell Line	embryonic stem cell
18	chr4:1235400-1240600	Genic enhancers	Fetal Muscle Leg	muscle
19	chr4:1235400-1240800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
20	chr4:1235400-1241000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
21	chr4:1235600-1240200	Enhancers	Rectal Mucosa Donor 29	rectum
22	chr4:1235600-1240200	Enhancers	Right Ventricle	heart
23	chr4:1235600-1240400	Weak transcription	H1 Cell Line	embryonic stem cell
24	chr4:1235600-1240400	Genic enhancers	Fetal Muscle Trunk	muscle
25	chr4:1235600-1240600	Genic enhancers	Fetal Adrenal Gland	Adrenal Gland
26	chr4:1235600-1240600	Enhancers	Right Atrium	heart
27	chr4:1235600-1241000	Weak transcription	HUES48 Cell Line	embryonic stem cell
28	chr4:1235600-1241000	Enhancers	Ovary	ovary
29	chr4:1235800-1240200	Enhancers	Adipose Nuclei	Adipose
30	chr4:1235800-1240200	Enhancers	Brain Substantia Nigra	brain
31	chr4:1235800-1240200	Enhancers	Duodenum Smooth Muscle	Duodenum
32	chr4:1235800-1240400	Weak transcription	HUES6 Cell Line	embryonic stem cell
33	chr4:1235800-1240400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
34	chr4:1235800-1240400	Enhancers	Stomach Mucosa	stomach
35	chr4:1235800-1240800	Enhancers	Brain Angular Gyrus	brain
36	chr4:1236000-1240200	Enhancers	Esophagus	oesophagus
37	chr4:1236000-1240600	Genic enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
38	chr4:1236200-1240200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
39	chr4:1236200-1240200	Genic enhancers	Cortex derived primary cultured neurospheres	brain
40	chr4:1236200-1240200	Enhancers	Brain Cingulate Gyrus	brain
41	chr4:1236200-1240600	Genic enhancers	Fetal Stomach	stomach
42	chr4:1236400-1240200	Enhancers	Colon Smooth Muscle	Colon
43	chr4:1236400-1240400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
44	chr4:1236400-1241000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
45	chr4:1236800-1240400	Genic enhancers	Primary mononuclear cells fromperipheralblood	Blood
46	chr4:1237000-1240400	Enhancers	Primary hematopoietic stem cells	blood
47	chr4:1237000-1240800	Genic enhancers	Gastric	stomach
48	chr4:1237000-1240800	Enhancers	Psoas Muscle	Psoas
49	chr4:1237000-1241800	Flanking Active TSS	Stomach Smooth Muscle	stomach
50	chr4:1237200-1240200	Enhancers	Primary B cells from cord blood	blood

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