Variant report

Variant	rs528511914
Chromosome Location	chr3:156166621-156166622
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:11)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:11 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:156166581..156169828-chr3:156169890..156173085,3	K562	blood:
2	chr3:156165881..156166850-chr3:156191700..156193084,7	MCF-7	breast:
3	chr3:156165868..156167744-chr3:156256177..156258339,2	K562	blood:
4	chr3:156166000..156166783-chr3:156227578..156228165,2	K562	blood:
5	chr3:156165808..156166675-chr3:156854917..156855626,2	K562	blood:
6	chr3:156165812..156167236-chr3:156191962..156193152,4	MCF-7	breast:
7	chr3:156166166..156166744-chr3:156226460..156227204,2	K562	blood:
8	chr3:156166346..156168652-chr3:156168846..156171078,2	MCF-7	breast:
9	chr3:156165003..156167494-chr3:156226890..156229666,2	K562	blood:
10	chr3:156165898..156166667-chr3:156192632..156193236,2	K562	blood:
11	chr3:156105641..156107748-chr3:156165114..156167904,2	MCF-7	breast:

No data

No data

No data

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1014755	chr3:155889430-156411894	Flanking Active TSS Strong transcription Weak transcription Enhancers Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
2	esv2125528	chr3:156166349-156166775	Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:156162200-156169400	Weak transcription	Aorta	Aorta
2	chr3:156162600-156174800	Weak transcription	Brain Hippocampus Middle	brain
3	chr3:156162800-156167600	Weak transcription	Brain Cingulate Gyrus	brain
4	chr3:156162800-156168200	Weak transcription	Stomach Smooth Muscle	stomach
5	chr3:156162800-156169000	Weak transcription	Colon Smooth Muscle	Colon
6	chr3:156164000-156168800	Weak transcription	Rectal Smooth Muscle	rectum
7	chr3:156164200-156167600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr3:156166000-156167800	Weak transcription	Brain Germinal Matrix	brain
9	chr3:156166600-156167600	Weak transcription	Pancreatic Islets	Pancreatic Islet

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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