Variant report

Variant	rs528528593
Chromosome Location	chr11:74953617-74953618
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049887	chr11:74937977-75040438	Strong transcription Weak transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Active TSS Enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv1036292	chr11:74937977-75059496	Weak transcription Genic enhancers Strong transcription Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	65 gene(s)	inside rSNPs	diseases
3	nsv1041640	chr11:74945824-75174688	Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS Genic enhancers Strong transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	94 gene(s)	inside rSNPs	diseases
4	nsv832211	chr11:74945839-75106125	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	66 gene(s)	inside rSNPs	diseases
5	esv3338705	chr11:74950304-74954802	Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Enhancers Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
6	esv3357620	chr11:74951054-74954252	Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Enhancers Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
7	esv3416910	chr11:74951204-74954302	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
8	esv3322804	chr11:74951829-74954677	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:74953000-74953800	Bivalent/Poised TSS	H9 Cell Line	embryonic stem cell
2	chr11:74953000-74953800	Bivalent Enhancer	Primary B cells from peripheral blood	blood
3	chr11:74953000-74953800	Bivalent Enhancer	Placenta	Placenta
4	chr11:74953400-74953800	Bivalent Enhancer	Primary hematopoietic stem cells short term culture	blood
5	chr11:74953400-74953800	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
6	chr11:74953400-74953800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
7	chr11:74953400-74953800	Bivalent Enhancer	Fetal Muscle Leg	muscle
8	chr11:74953400-74956600	Weak transcription	Pancreas	Pancrea
9	chr11:74953400-74957000	Weak transcription	Right Atrium	heart
10	chr11:74953600-74953800	Flanking Bivalent TSS/Enh	iPS-15b Cell Line	embryonic stem cell
11	chr11:74953600-74953800	Bivalent Enhancer	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr11:74953600-74953800	Bivalent Enhancer	Primary neutrophils fromperipheralblood	blood
13	chr11:74953600-74953800	Bivalent Enhancer	Primary T helper naive cells from peripheral blood	blood
14	chr11:74953600-74953800	Bivalent Enhancer	Primary T helper cells PMA-I stimulated	--
15	chr11:74953600-74953800	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr11:74953600-74953800	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
17	chr11:74953600-74953800	Bivalent/Poised TSS	A549	lung
18	chr11:74953600-74953800	Bivalent Enhancer	HepG2	liver
19	chr11:74953600-74954000	Bivalent Enhancer	iPS DF 19.11 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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