The 2.0 version of rSNPBase

Variant report

Variant rs528751943
Chromosome Location chr6:150518111-150518112
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:150499600-150519600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr6:150514800-150524000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr6:150515200-150518200 Weak transcription Right Atrium heart
4 chr6:150515400-150519600 Weak transcription Fetal Brain Male brain
5 chr6:150516400-150518400 Enhancers Rectal Mucosa Donor 31 rectum
6 chr6:150516400-150519000 Enhancers Skeletal Muscle Female skeletal muscle
7 chr6:150516600-150518200 Enhancers Fetal Kidney kidney
8 chr6:150516800-150518800 Enhancers Primary hematopoietic stem cells short term culture blood
9 chr6:150516800-150518800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr6:150516800-150518800 Enhancers Fetal Intestine Large intestine
11 chr6:150516800-150518800 Enhancers Fetal Intestine Small intestine
12 chr6:150516800-150518800 Enhancers Fetal Muscle Leg muscle
13 chr6:150517000-150518200 Enhancers Pancreatic Islets Pancreatic Islet
14 chr6:150517000-150518200 Enhancers Rectal Mucosa Donor 29 rectum
15 chr6:150517000-150518400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr6:150517000-150518600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr6:150517000-150518600 Enhancers HMEC breast
18 chr6:150517000-150518600 Enhancers NHEK skin
19 chr6:150517000-150519000 Enhancers Colonic Mucosa Colon
20 chr6:150517200-150518200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr6:150517200-150518200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr6:150517200-150518200 Enhancers Fetal Lung lung
23 chr6:150517200-150518200 Weak transcription Fetal Muscle Trunk muscle
24 chr6:150517200-150518200 Weak transcription Lung lung
25 chr6:150517200-150518200 Weak transcription Pancreas Pancrea
26 chr6:150517200-150518200 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr6:150517200-150518200 Enhancers Stomach Mucosa stomach
28 chr6:150517200-150518400 Enhancers Esophagus oesophagus
29 chr6:150517200-150518400 Enhancers Rectal Smooth Muscle rectum
30 chr6:150517400-150518400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr6:150517400-150518400 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr6:150517400-150519000 Enhancers Skeletal Muscle Male skeletal muscle
33 chr6:150517400-150519800 Weak transcription K562 blood
34 chr6:150517600-150529200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr6:150517800-150518200 Flanking Active TSS Fetal Heart heart
36 chr6:150517800-150518600 Enhancers Fetal Brain Female brain
37 chr6:150518000-150518200 Flanking Active TSS Duodenum Mucosa Duodenum
38 chr6:150518000-150518400 Enhancers Breast Myoepithelial Primary Cells Breast
39 chr6:150518000-150518600 Enhancers Placenta Placenta
40 chr6:150518000-150518600 Enhancers Psoas Muscle Psoas
41 chr6:150518000-150518600 Enhancers Right Ventricle heart
42 chr6:150518000-150522200 Enhancers Left Ventricle heart

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Last update: Aug 31, 2015