Variant report

Variant	rs529005714
Chromosome Location	chr11:72352071-72352072
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BCL3	chr11:72351828-72352216	GM12878	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:72341497..72343932-chr11:72350783..72352444,2	K562	blood:
2	chr11:72308196..72310111-chr11:72350959..72352581,2	MCF-7	breast:

Variant related genes	Relation type
PDE2A	TF binding region
ENSG00000255808	TF binding region

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1806140	chr11:72268466-72546175	Enhancers Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	77 gene(s)	inside rSNPs	diseases
2	esv1832864	chr11:72270965-72389125	Bivalent Enhancer Bivalent/Poised TSS Active TSS Enhancers Weak transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	19 gene(s)	inside rSNPs	diseases
3	nsv832207	chr11:72272750-72469122	Weak transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	31 gene(s)	inside rSNPs	diseases
4	nsv523601	chr11:72281884-72430935	Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	24 gene(s)	inside rSNPs	diseases
5	nsv825991	chr11:72320642-72385221	Genic enhancers Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	11 gene(s)	inside rSNPs	diseases
6	esv3394774	chr11:72320884-72694077	Genic enhancers Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
7	esv3413076	chr11:72349804-72353302	Weak transcription Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
8	esv18878	chr11:72350800-72352250	Bivalent Enhancer Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:40 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:72348600-72352600	Enhancers	Lung	lung
2	chr11:72348800-72352800	Weak transcription	Gastric	stomach
3	chr11:72349000-72352200	Weak transcription	Pancreas	Pancrea
4	chr11:72350600-72352800	Bivalent/Poised TSS	Fetal Adrenal Gland	Adrenal Gland
5	chr11:72350800-72352800	Active TSS	Brain Inferior Temporal Lobe	brain
6	chr11:72350800-72353000	Active TSS	Spleen	Spleen
7	chr11:72351000-72352400	Flanking Active TSS	Right Ventricle	heart
8	chr11:72351000-72352600	Bivalent/Poised TSS	Duodenum Mucosa	Duodenum
9	chr11:72351000-72352600	Flanking Bivalent TSS/Enh	Skeletal Muscle Male	skeletal muscle
10	chr11:72351000-72352800	Active TSS	Esophagus	oesophagus
11	chr11:72351000-72353000	Active TSS	Psoas Muscle	Psoas
12	chr11:72351000-72354200	Active TSS	Left Ventricle	heart
13	chr11:72351000-72354400	Active TSS	Right Atrium	heart
14	chr11:72351200-72352200	Active TSS	HSMMtube	muscle
15	chr11:72351200-72352400	Flanking Bivalent TSS/Enh	Brain Hippocampus Middle	brain
16	chr11:72351200-72352800	Bivalent/Poised TSS	Rectal Mucosa Donor 29	rectum
17	chr11:72351200-72353000	Flanking Active TSS	Colon Smooth Muscle	Colon
18	chr11:72351400-72352200	Bivalent/Poised TSS	Fetal Kidney	kidney
19	chr11:72351400-72352200	Flanking Bivalent TSS/Enh	Stomach Smooth Muscle	stomach
20	chr11:72351400-72353000	Bivalent Enhancer	Fetal Brain Male	brain
21	chr11:72351400-72354400	Active TSS	Brain Angular Gyrus	brain
22	chr11:72351600-72352400	Active TSS	Brain Anterior Caudate	brain
23	chr11:72351600-72352400	Bivalent/Poised TSS	Skeletal Muscle Female	skeletal muscle
24	chr11:72351600-72352800	Flanking Active TSS	Rectal Smooth Muscle	rectum
25	chr11:72351800-72352200	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
26	chr11:72351800-72352200	Bivalent/Poised TSS	Fetal Muscle Trunk	muscle
27	chr11:72351800-72352800	Bivalent/Poised TSS	Adipose Nuclei	Adipose
28	chr11:72351800-72352800	Bivalent/Poised TSS	Fetal Intestine Small	intestine
29	chr11:72351800-72352800	Bivalent/Poised TSS	Fetal Stomach	stomach
30	chr11:72351800-72354200	Active TSS	Pancreatic Islets	Pancreatic Islet
31	chr11:72351800-72354400	Active TSS	Ovary	ovary
32	chr11:72352000-72352200	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
33	chr11:72352000-72352200	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
34	chr11:72352000-72352200	Flanking Bivalent TSS/Enh	Fetal Muscle Leg	muscle
35	chr11:72352000-72352200	Flanking Bivalent TSS/Enh	Hela-S3	cervix
36	chr11:72352000-72352400	Bivalent/Poised TSS	Fetal Brain Female	brain
37	chr11:72352000-72352800	Active TSS	Liver	Liver
38	chr11:72352000-72352800	Flanking Active TSS	Brain Cingulate Gyrus	brain
39	chr11:72352000-72352800	Bivalent/Poised TSS	Colonic Mucosa	Colon
40	chr11:72352000-72353000	Bivalent Enhancer	iPS DF 19.11 Cell Line	embryonic stem cell

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