Variant report

Variant	rs529068098
Chromosome Location	chr6:109868874-109868875
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1026012	chr6:109851638-109999379	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv604484	chr6:109851937-109997529	ZNF genes & repeats Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv1019389	chr6:109868058-109987502	Weak transcription Flanking Active TSS ZNF genes & repeats Enhancers Strong transcription Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv538416	chr6:109868058-109987502	Genic enhancers ZNF genes & repeats Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:109848400-109870400	Weak transcription	Primary B cells from peripheral blood	blood
2	chr6:109850800-109870000	Weak transcription	Left Ventricle	heart
3	chr6:109852200-109878400	Weak transcription	Pancreas	Pancrea
4	chr6:109859200-109873000	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr6:109860200-109870000	Weak transcription	Adipose Nuclei	Adipose
6	chr6:109860600-109870000	Weak transcription	Brain Hippocampus Middle	brain
7	chr6:109861200-109870200	Weak transcription	Pancreatic Islets	Pancreatic Islet
8	chr6:109862200-109869600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
9	chr6:109862200-109869600	Weak transcription	Primary hematopoietic stem cells	blood
10	chr6:109862200-109870000	Weak transcription	Primary B cells from cord blood	blood
11	chr6:109862200-109878200	Weak transcription	Rectal Mucosa Donor 31	rectum
12	chr6:109862200-109878400	Weak transcription	Thymus	Thymus
13	chr6:109863000-109870000	Weak transcription	Duodenum Smooth Muscle	Duodenum
14	chr6:109864200-109870200	Weak transcription	Brain Anterior Caudate	brain
15	chr6:109864200-109870200	Weak transcription	Skeletal Muscle Male	skeletal muscle
16	chr6:109865400-109870000	Weak transcription	Liver	Liver
17	chr6:109865800-109869000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr6:109866400-109870200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr6:109867000-109869600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr6:109867000-109885800	Weak transcription	Ovary	ovary
21	chr6:109867400-109869600	Weak transcription	Primary T cells from cord blood	blood

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