Variant report

Variant rs529095920
Chromosome Location chr11:64409203-64409204
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:64403000-64410400 Weak transcription Aorta Aorta
2 chr11:64406000-64409600 Weak transcription HSMMtube muscle
3 chr11:64406000-64409800 Weak transcription Right Atrium heart
4 chr11:64406600-64409400 Active TSS Brain Inferior Temporal Lobe brain
5 chr11:64406600-64410800 Active TSS Brain Angular Gyrus brain
6 chr11:64406800-64411400 Active TSS Brain Anterior Caudate brain
7 chr11:64407400-64409400 Transcr. at gene 5' and 3' Brain Germinal Matrix brain
8 chr11:64407800-64409400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
9 chr11:64407800-64409400 Active TSS Brain Hippocampus Middle brain
10 chr11:64407800-64409400 Bivalent Enhancer Fetal Lung lung
11 chr11:64408000-64409400 Weak transcription Spleen Spleen
12 chr11:64408200-64409800 Strong transcription HSMM muscle
13 chr11:64408400-64409600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr11:64408400-64409600 Flanking Active TSS Fetal Brain Female brain
15 chr11:64408400-64409800 Enhancers Ovary ovary
16 chr11:64408400-64410000 Flanking Active TSS Fetal Brain Male brain
17 chr11:64408600-64409400 Flanking Active TSS Colon Smooth Muscle Colon
18 chr11:64408600-64409400 Bivalent Enhancer Fetal Kidney kidney
19 chr11:64408600-64409600 Bivalent/Poised TSS Stomach Smooth Muscle stomach
20 chr11:64408800-64409400 Transcr. at gene 5' and 3' Brain Dorsolateral Prefrontal Cortex brain
21 chr11:64408800-64411400 Weak transcription Gastric stomach
22 chr11:64409000-64409400 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
23 chr11:64409200-64409400 Bivalent/Poised TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr11:64409200-64409600 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr11:64409200-64409600 Bivalent Enhancer iPS DF 19.11 Cell Line embryonic stem cell
26 chr11:64409200-64409600 Flanking Bivalent TSS/Enh Rectal Smooth Muscle rectum
27 chr11:64409200-64409800 Flanking Active TSS Brain Cingulate Gyrus brain
28 chr11:64409200-64409800 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
29 chr11:64409200-64410000 Flanking Bivalent TSS/Enh Fetal Stomach stomach
30 chr11:64409200-64410400 Bivalent Enhancer Fetal Thymus thymus
31 chr11:64409200-64410600 Bivalent Enhancer Primary T helper cells fromperipheralblood blood
32 chr11:64409200-64411000 Bivalent/Poised TSS Fetal Intestine Small intestine
33 chr11:64409200-64411400 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
34 chr11:64409200-64411400 Bivalent/Poised TSS Fetal Muscle Trunk muscle
35 chr11:64409200-64411600 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum

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