Variant report

Variant	rs529110407
Chromosome Location	chr14:38888969-38888970
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533235	chr14:38558180-39117391	Weak transcription Bivalent/Poised TSS Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv530640	chr14:38702117-38927901	Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	esv2754119	chr14:38825349-38988849	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
4	esv1846932	chr14:38842788-38944821	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv510632	chr14:38868313-38939927	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv564409	chr14:38870456-38930054	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv901655	chr14:38887881-39019800	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:38878800-38889000	Weak transcription	Aorta	Aorta
2	chr14:38888000-38890000	Enhancers	Brain Germinal Matrix	brain
3	chr14:38888800-38889000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr14:38888800-38889000	Enhancers	Brain Angular Gyrus	brain
5	chr14:38888800-38889000	Active TSS	Brain Anterior Caudate	brain
6	chr14:38888800-38889000	Active TSS	Brain Substantia Nigra	brain
7	chr14:38888800-38889200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr14:38888800-38889200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr14:38888800-38889200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr14:38888800-38889200	Enhancers	Brain Cingulate Gyrus	brain
11	chr14:38888800-38889200	Active TSS	Brain Hippocampus Middle	brain
12	chr14:38888800-38889200	Active TSS	Fetal Brain Female	brain
13	chr14:38888800-38889200	Enhancers	Fetal Lung	lung
14	chr14:38888800-38889200	Enhancers	HepG2	liver
15	chr14:38888800-38889400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
16	chr14:38888800-38889400	Enhancers	HUVEC	blood vessel
17	chr14:38888800-38890000	Enhancers	Breast Myoepithelial Primary Cells	Breast
18	chr14:38888800-38890200	Enhancers	NHDF-Ad	bronchial
19	chr14:38888800-38890400	Enhancers	NHLF	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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