Variant report

Variant	rs529126410
Chromosome Location	chr5:95305370-95305371
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758003	chr5:95231706-95540433	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	20 gene(s)	inside rSNPs	diseases
2	esv2759355	chr5:95231706-95540433	Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	20 gene(s)	inside rSNPs	diseases
3	nsv823146	chr5:95300912-95453557	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	9 gene(s)	inside rSNPs	diseases
4	esv2757121	chr5:95304236-95539536	Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:95298400-95309200	Weak transcription	NHLF	lung
2	chr5:95298800-95322600	Weak transcription	Pancreas	Pancrea
3	chr5:95299600-95309000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr5:95300000-95308600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
5	chr5:95302800-95309000	Weak transcription	Stomach Mucosa	stomach
6	chr5:95304800-95306800	Enhancers	Primary neutrophils fromperipheralblood	blood
7	chr5:95305000-95306000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr5:95305000-95306000	Enhancers	Monocytes-CD14+_RO01746	blood
9	chr5:95305000-95306200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr5:95305000-95306200	Enhancers	Primary monocytes fromperipheralblood	blood
11	chr5:95305200-95305400	Enhancers	Fetal Intestine Large	intestine
12	chr5:95305200-95305600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr5:95305200-95305800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr5:95305200-95305800	Enhancers	Muscle Satellite Cultured Cells	--
15	chr5:95305200-95306000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr5:95305200-95306000	Enhancers	Osteobl	bone
17	chr5:95305200-95306400	Enhancers	Liver	Liver
18	chr5:95305200-95306400	Flanking Active TSS	HepG2	liver
19	chr5:95305200-95310600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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