Variant report

Variant	rs529213606
Chromosome Location	chr13:93797617-93797618
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869070	chr13:93347616-94286933	Enhancers Weak transcription Genic enhancers Bivalent Enhancer Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv832682	chr13:93700861-93874801	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv983693	chr13:93793008-93800150	Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:93796400-93800000	Enhancers	Fetal Intestine Small	intestine
2	chr13:93796400-93800200	Enhancers	Fetal Intestine Large	intestine
3	chr13:93797200-93797800	Enhancers	iPS-20b Cell Line	embryonic stem cell
4	chr13:93797200-93798200	Enhancers	ES-I3 Cell Line	embryonic stem cell
5	chr13:93797200-93799000	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr13:93797400-93797800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr13:93797400-93798000	Enhancers	H9 Cell Line	embryonic stem cell
8	chr13:93797400-93798200	Enhancers	H1 Cell Line	embryonic stem cell
9	chr13:93797400-93798400	Enhancers	HUES48 Cell Line	embryonic stem cell
10	chr13:93797400-93799000	Enhancers	HUES64 Cell Line	embryonic stem cell
11	chr13:93797600-93797800	Bivalent/Poised TSS	Left Ventricle	heart
12	chr13:93797600-93798000	Enhancers	iPS-15b Cell Line	embryonic stem cell
13	chr13:93797600-93798200	Enhancers	HUES6 Cell Line	embryonic stem cell
14	chr13:93797600-93800400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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