Variant report

Variant	rs529265927
Chromosome Location	chr3:134010341-134010342
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3522171	chr3:133889405-134156571	Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
2	esv3522172	chr3:133889405-134156571	Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent/Poised TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
3	esv3439062	chr3:134010287-134013035	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:45 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:134007600-134010400	Weak transcription	Colonic Mucosa	Colon
2	chr3:134008200-134011000	Enhancers	Fetal Lung	lung
3	chr3:134008800-134010600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr3:134009600-134011000	Enhancers	Fetal Stomach	stomach
5	chr3:134009800-134010400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr3:134009800-134010600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr3:134009800-134010600	Enhancers	Colon Smooth Muscle	Colon
8	chr3:134009800-134010600	Enhancers	Ovary	ovary
9	chr3:134009800-134010800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr3:134009800-134010800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr3:134009800-134010800	Enhancers	Skeletal Muscle Male	skeletal muscle
12	chr3:134009800-134010800	Enhancers	Hela-S3	cervix
13	chr3:134009800-134011000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr3:134009800-134011000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr3:134009800-134011000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
16	chr3:134009800-134011000	Enhancers	Fetal Heart	heart
17	chr3:134009800-134011000	Enhancers	Skeletal Muscle Female	skeletal muscle
18	chr3:134009800-134011200	Enhancers	Breast Myoepithelial Primary Cells	Breast
19	chr3:134010000-134010600	Enhancers	HUES6 Cell Line	embryonic stem cell
20	chr3:134010000-134010600	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
21	chr3:134010000-134010600	Enhancers	Brain Substantia Nigra	brain
22	chr3:134010000-134010600	Enhancers	Duodenum Smooth Muscle	Duodenum
23	chr3:134010000-134010600	Enhancers	Placenta	Placenta
24	chr3:134010000-134010600	Enhancers	Left Ventricle	heart
25	chr3:134010000-134010600	Enhancers	Rectal Smooth Muscle	rectum
26	chr3:134010000-134010600	Enhancers	Right Atrium	heart
27	chr3:134010000-134010600	Enhancers	K562	blood
28	chr3:134010000-134011000	Enhancers	ES-I3 Cell Line	embryonic stem cell
29	chr3:134010000-134011000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
30	chr3:134010000-134011000	Enhancers	Adipose Nuclei	Adipose
31	chr3:134010000-134011000	Enhancers	Fetal Muscle Leg	muscle
32	chr3:134010000-134011000	Enhancers	Right Ventricle	heart
33	chr3:134010200-134010600	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr3:134010200-134010600	Enhancers	Brain Anterior Caudate	brain
35	chr3:134010200-134010600	Enhancers	Brain Hippocampus Middle	brain
36	chr3:134010200-134010600	Enhancers	Psoas Muscle	Psoas
37	chr3:134010200-134010600	Enhancers	Dnd41	blood
38	chr3:134010200-134010600	Enhancers	NHDF-Ad	bronchial
39	chr3:134010200-134010800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
40	chr3:134010200-134010800	Flanking Active TSS	Stomach Smooth Muscle	stomach
41	chr3:134010200-134011000	Enhancers	Muscle Satellite Cultured Cells	--
42	chr3:134010200-134011000	Enhancers	Cortex derived primary cultured neurospheres	brain
43	chr3:134010200-134011000	Enhancers	Small Intestine	intestine
44	chr3:134010200-134011000	Enhancers	HSMMtube	muscle
45	chr3:134010200-134011200	Enhancers	NHLF	lung

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