The 2.0 version of rSNPBase

Variant report

Variant rs529347848
Chromosome Location chr6:143917116-143917117
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:143895600-143918200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr6:143899400-143918000 Weak transcription Spleen Spleen
3 chr6:143899800-143919200 Weak transcription Monocytes-CD14+_RO01746 blood
4 chr6:143900800-143918200 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr6:143901200-143918000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr6:143903400-143918200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr6:143903600-143918600 Weak transcription Primary T helper cells PMA-I stimulated --
8 chr6:143910400-143918200 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr6:143910600-143918000 Weak transcription Right Atrium heart
10 chr6:143911200-143929200 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr6:143912800-143918200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr6:143913000-143918800 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr6:143913200-143919000 Weak transcription Primary T cells fromperipheralblood blood
14 chr6:143913200-143928400 Weak transcription Aorta Aorta
15 chr6:143914400-143917400 Enhancers Pancreatic Islets Pancreatic Islet
16 chr6:143914800-143919400 Weak transcription Stomach Mucosa stomach
17 chr6:143915600-143917200 Enhancers HUES48 Cell Line embryonic stem cell
18 chr6:143915600-143918400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
19 chr6:143915600-143919000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr6:143915800-143917200 Enhancers HUES64 Cell Line embryonic stem cell
21 chr6:143915800-143917400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr6:143915800-143918200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr6:143916000-143917400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr6:143916000-143917600 Weak transcription Fetal Muscle Leg muscle
25 chr6:143916000-143917800 Weak transcription Left Ventricle heart
26 chr6:143916000-143919400 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr6:143916200-143917200 Weak transcription Ovary ovary
28 chr6:143916200-143917600 Weak transcription Lung lung
29 chr6:143916200-143918000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr6:143916200-143918800 Enhancers NHDF-Ad bronchial
31 chr6:143916600-143917200 Enhancers Muscle Satellite Cultured Cells --
32 chr6:143916600-143917400 Enhancers HSMMtube muscle
33 chr6:143916600-143917600 Weak transcription NHLF lung
34 chr6:143916600-143918200 Weak transcription Stomach Smooth Muscle stomach
35 chr6:143916800-143917200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr6:143916800-143918200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr6:143917000-143917200 Enhancers Fetal Intestine Large intestine
38 chr6:143917000-143918200 Weak transcription Hela-S3 cervix
39 chr6:143917000-143920200 Enhancers Placenta Placenta
40 chr6:143917000-143973600 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015