Variant report

Variant	rs529389366
Chromosome Location	chr7:63030852-63030853
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:19 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3478284	chr7:62531504-63351786	ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription	TF binding region CpG island lncRNA miRNA	44 gene(s)	inside rSNPs	diseases
2	esv3478287	chr7:62531504-63351786	ZNF genes & repeats Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island lncRNA miRNA	44 gene(s)	inside rSNPs	diseases
3	nsv1023293	chr7:62619341-63109895	ZNF genes & repeats Active TSS Weak transcription	TF binding region CpG island lncRNA miRNA	35 gene(s)	inside rSNPs	diseases
4	nsv1016602	chr7:62623431-63339807	ZNF genes & repeats Bivalent/Poised TSS Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh	TF binding region CpG island lncRNA miRNA	39 gene(s)	inside rSNPs	diseases
5	nsv888230	chr7:62705018-63294907	ZNF genes & repeats Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers	TF binding region CpG island lncRNA miRNA	34 gene(s)	inside rSNPs	diseases
6	nsv888249	chr7:62910947-63109270	ZNF genes & repeats Active TSS Weak transcription	TF binding region CpG island lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
7	nsv1032341	chr7:62925821-63112016	Active TSS ZNF genes & repeats Weak transcription	TF binding region CpG island lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
8	nsv427784	chr7:62930318-63135087	ZNF genes & repeats Weak transcription Active TSS Enhancers	TF binding region CpG island lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
9	nsv1023394	chr7:62933472-63147404	ZNF genes & repeats Enhancers Weak transcription Active TSS	TF binding region CpG island lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
10	nsv888250	chr7:62935337-63131060	ZNF genes & repeats Active TSS Weak transcription Enhancers	TF binding region CpG island lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
11	nsv888251	chr7:62939356-63078112	ZNF genes & repeats Active TSS Weak transcription	TF binding region CpG island lncRNA	7 gene(s)	inside rSNPs	diseases
12	nsv888252	chr7:62939356-63131060	ZNF genes & repeats Active TSS Enhancers Weak transcription	TF binding region CpG island lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
13	esv32550	chr7:62985473-63249879	Weak transcription Active TSS Enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
14	nsv888253	chr7:62985573-63089411	Weak transcription ZNF genes & repeats Active TSS	TF binding region CpG island lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
15	nsv482607	chr7:62988179-63146258	ZNF genes & repeats Weak transcription Enhancers Active TSS	TF binding region CpG island lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
16	esv1812304	chr7:63013901-63100502	ZNF genes & repeats Active TSS Weak transcription	TF binding region CpG island lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
17	esv3357912	chr7:63029017-63033415	Active TSS ZNF genes & repeats Weak transcription	n/a	n/a	inside rSNPs	diseases
18	esv3349543	chr7:63029717-63032615	ZNF genes & repeats Active TSS Weak transcription	n/a	n/a	inside rSNPs	diseases
19	esv3362352	chr7:63029717-63032615	ZNF genes & repeats Active TSS Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:63030800-63031200	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr7:63030800-63031200	Active TSS	Brain Cingulate Gyrus	brain
3	chr7:63030800-63031400	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr7:63030800-63031400	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
5	chr7:63030800-63031400	ZNF genes & repeats	Adipose Nuclei	Adipose
6	chr7:63030800-63031400	ZNF genes & repeats	Duodenum Mucosa	Duodenum
7	chr7:63030800-63031400	ZNF genes & repeats	Skeletal Muscle Male	skeletal muscle
8	chr7:63030800-63031400	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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