Variant report

Variant rs529408005
Chromosome Location chr21:46728175-46728176
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46713800-46738800 Weak transcription Gastric stomach
2 chr21:46715600-46730000 Weak transcription H9 Cell Line embryonic stem cell
3 chr21:46715800-46730000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr21:46717600-46728200 Weak transcription A549 lung
5 chr21:46719400-46728400 Enhancers Fetal Muscle Trunk muscle
6 chr21:46721000-46728200 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr21:46722800-46728600 Weak transcription Fetal Thymus thymus
8 chr21:46722800-46730200 Enhancers Fetal Muscle Leg muscle
9 chr21:46723000-46730800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr21:46724200-46730200 Enhancers Pancreas Pancrea
11 chr21:46724800-46728600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr21:46724800-46728600 Enhancers NH-A brain
13 chr21:46725000-46728800 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr21:46725000-46729600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
15 chr21:46725000-46730200 Enhancers Fetal Lung lung
16 chr21:46725600-46729000 Enhancers Esophagus oesophagus
17 chr21:46725800-46728800 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr21:46725800-46730800 Enhancers Fetal Adrenal Gland Adrenal Gland
19 chr21:46725800-46730800 Enhancers Ovary ovary
20 chr21:46726000-46729200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
21 chr21:46726200-46728200 Enhancers Fetal Kidney kidney
22 chr21:46726200-46728400 Enhancers Breast Myoepithelial Primary Cells Breast
23 chr21:46726200-46728800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr21:46726200-46729400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
25 chr21:46726200-46729600 Enhancers Cortex derived primary cultured neurospheres brain
26 chr21:46726200-46730200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr21:46726200-46730200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
28 chr21:46726200-46730200 Enhancers Brain Substantia Nigra brain
29 chr21:46726200-46730200 Bivalent Enhancer Placenta Placenta
30 chr21:46726200-46731400 Enhancers Fetal Intestine Small intestine
31 chr21:46726400-46728200 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
32 chr21:46726400-46729200 Enhancers Lung lung
33 chr21:46726400-46730000 Enhancers NHLF lung
34 chr21:46726400-46730200 Enhancers Liver Liver
35 chr21:46726400-46730200 Enhancers Left Ventricle heart
36 chr21:46726400-46730200 Enhancers Right Atrium heart
37 chr21:46726400-46730400 Enhancers Right Ventricle heart
38 chr21:46726600-46728600 Enhancers Fetal Heart heart
39 chr21:46726600-46728800 Flanking Active TSS HepG2 liver
40 chr21:46726600-46729000 Enhancers Rectal Mucosa Donor 31 rectum
41 chr21:46726600-46729800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr21:46726600-46730000 Enhancers NHDF-Ad bronchial
43 chr21:46726800-46728200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr21:46726800-46730800 Enhancers HSMMtube muscle
45 chr21:46727000-46728200 Weak transcription H1 Cell Line embryonic stem cell
46 chr21:46727000-46730800 Enhancers Brain Anterior Caudate brain
47 chr21:46727200-46729000 Enhancers Rectal Mucosa Donor 29 rectum
48 chr21:46727200-46729000 Flanking Active TSS HSMM muscle
49 chr21:46727200-46729600 Enhancers HMEC breast
50 chr21:46727200-46730200 Enhancers Brain Hippocampus Middle brain

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