Variant report

Variant rs529424828
Chromosome Location chr11:108724810-108724811
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:108707600-108740800 Weak transcription HMEC breast
2 chr11:108708200-108729200 Weak transcription iPS-20b Cell Line embryonic stem cell
3 chr11:108710200-108729200 Weak transcription HUES48 Cell Line embryonic stem cell
4 chr11:108710200-108729400 Weak transcription iPS-18 Cell Line embryonic stem cell
5 chr11:108710200-108735800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr11:108710200-108738200 Weak transcription Gastric stomach
7 chr11:108710600-108729800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr11:108712400-108725000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr11:108715400-108738200 Weak transcription K562 blood
10 chr11:108715600-108725200 Weak transcription Liver Liver
11 chr11:108717600-108729600 Weak transcription Dnd41 blood
12 chr11:108717800-108729400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr11:108721000-108725000 Enhancers Fetal Lung lung
14 chr11:108721400-108728200 Weak transcription Lung lung
15 chr11:108721600-108742200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr11:108722600-108725000 Enhancers NHDF-Ad bronchial
17 chr11:108723200-108725000 Enhancers Fetal Stomach stomach
18 chr11:108723200-108725200 Enhancers Psoas Muscle Psoas
19 chr11:108723600-108733200 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr11:108723800-108725000 Enhancers Primary T killer memory cells from peripheral blood blood
21 chr11:108723800-108725000 Enhancers Adipose Nuclei Adipose
22 chr11:108723800-108725000 Enhancers Left Ventricle heart
23 chr11:108723800-108725400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr11:108724000-108725000 Enhancers Cortex derived primary cultured neurospheres brain
25 chr11:108724000-108725400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr11:108724200-108725400 Flanking Active TSS Fetal Heart heart
27 chr11:108724200-108725400 Enhancers NH-A brain
28 chr11:108724400-108725000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr11:108724400-108725000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
30 chr11:108724400-108725000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr11:108724400-108725000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
32 chr11:108724400-108725000 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
33 chr11:108724400-108725000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
34 chr11:108724400-108725000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
35 chr11:108724400-108725000 Enhancers Brain Anterior Caudate brain
36 chr11:108724400-108725000 Enhancers Fetal Adrenal Gland Adrenal Gland
37 chr11:108724400-108725000 Enhancers Fetal Muscle Leg muscle
38 chr11:108724400-108725000 Enhancers Sigmoid Colon Sigmoid Colon
39 chr11:108724400-108725200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr11:108724400-108725200 Enhancers Muscle Satellite Cultured Cells --
41 chr11:108724400-108725200 Flanking Active TSS Colon Smooth Muscle Colon
42 chr11:108724400-108725200 Flanking Active TSS Skeletal Muscle Male skeletal muscle
43 chr11:108724400-108725200 Flanking Active TSS Skeletal Muscle Female skeletal muscle
44 chr11:108724400-108725200 Enhancers Small Intestine intestine
45 chr11:108724400-108725200 Flanking Active TSS GM12878-XiMat blood
46 chr11:108724400-108725200 Enhancers NHLF lung
47 chr11:108724400-108725400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr11:108724400-108725400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr11:108724400-108725400 Enhancers Primary hematopoietic stem cells short term culture blood
50 chr11:108724400-108725400 Enhancers Ovary ovary

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