Variant report

Variant rs529560498
Chromosome Location chr1:179199284-179199285
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179197400-179199400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
2 chr1:179197600-179199400 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr1:179197600-179199400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
4 chr1:179197600-179199400 Active TSS Aorta Aorta
5 chr1:179197600-179199400 Active TSS Right Atrium heart
6 chr1:179197600-179199800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr1:179197600-179199800 Active TSS NHLF lung
8 chr1:179197800-179199400 Active TSS ES-WA7 Cell Line embryonic stem cell
9 chr1:179197800-179199400 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:179197800-179199400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
11 chr1:179197800-179199400 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
12 chr1:179197800-179199400 Active TSS Duodenum Smooth Muscle Duodenum
13 chr1:179197800-179199400 Active TSS Esophagus oesophagus
14 chr1:179197800-179199400 Active TSS Pancreatic Islets Pancreatic Islet
15 chr1:179197800-179199400 Active TSS Placenta Placenta
16 chr1:179197800-179199400 Active TSS Left Ventricle heart
17 chr1:179197800-179199400 Active TSS Ovary ovary
18 chr1:179197800-179199400 Active TSS Psoas Muscle Psoas
19 chr1:179197800-179199400 Active TSS A549 lung
20 chr1:179197800-179199600 Active TSS Breast Myoepithelial Primary Cells Breast
21 chr1:179198000-179199400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr1:179198000-179199400 Active TSS H9 Cell Line embryonic stem cell
23 chr1:179198000-179199400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr1:179198000-179199400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr1:179198000-179199400 Active TSS HUES6 Cell Line embryonic stem cell
26 chr1:179198000-179199400 Active TSS iPS-15b Cell Line embryonic stem cell
27 chr1:179198000-179199400 Active TSS iPS-18 Cell Line embryonic stem cell
28 chr1:179198000-179199400 Active TSS Colon Smooth Muscle Colon
29 chr1:179198000-179199400 Active TSS Fetal Brain Female brain
30 chr1:179198000-179199400 Active TSS Fetal Kidney kidney
31 chr1:179198000-179199400 Active TSS Fetal Stomach stomach
32 chr1:179198000-179199400 Active TSS Gastric stomach
33 chr1:179198000-179199400 Active TSS Small Intestine intestine
34 chr1:179198000-179199400 Active TSS NHDF-Ad bronchial
35 chr1:179198000-179199600 Active TSS ES-I3 Cell Line embryonic stem cell
36 chr1:179198000-179199600 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr1:179198000-179199600 Active TSS Brain Inferior Temporal Lobe brain
38 chr1:179198200-179199400 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
39 chr1:179198200-179199400 Active TSS Primary T cells from cord blood blood
40 chr1:179198200-179199400 Active TSS Primary hematopoietic stem cells blood
41 chr1:179198200-179199400 Active TSS Primary T killer naive cells fromperipheralblood blood
42 chr1:179198200-179199400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
43 chr1:179198200-179199400 Active TSS Lung lung
44 chr1:179198200-179199400 Active TSS Pancreas Pancrea
45 chr1:179198200-179199400 Active TSS Placenta Amnion Placenta Amnion
46 chr1:179198200-179199400 Active TSS Right Ventricle heart
47 chr1:179198200-179199400 Active TSS Skeletal Muscle Male skeletal muscle
48 chr1:179198200-179199400 Active TSS Thymus Thymus
49 chr1:179198200-179199400 Active TSS GM12878-XiMat blood
50 chr1:179198200-179199400 Active TSS HSMMtube muscle

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