Variant report

Variant rs529639787
Chromosome Location chr22:30088481-30088482
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:30020800-30097000 Weak transcription Stomach Mucosa stomach
2 chr22:30050400-30093000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
3 chr22:30054000-30094800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
4 chr22:30055400-30095200 Strong transcription Fetal Intestine Small intestine
5 chr22:30056000-30094800 Strong transcription Primary hematopoietic stem cells short term culture blood
6 chr22:30060200-30093600 Strong transcription Fetal Thymus thymus
7 chr22:30063400-30094600 Strong transcription Primary T cells from cord blood blood
8 chr22:30075400-30097400 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr22:30076800-30096400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr22:30077800-30096400 Weak transcription Small Intestine intestine
11 chr22:30079600-30097000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr22:30079600-30097400 Weak transcription Hela-S3 cervix
13 chr22:30080000-30097000 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr22:30080200-30089600 Weak transcription Colonic Mucosa Colon
15 chr22:30080200-30098800 Weak transcription GM12878-XiMat blood
16 chr22:30081000-30096400 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr22:30081200-30096400 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr22:30081400-30089000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr22:30082000-30088800 Weak transcription Primary neutrophils fromperipheralblood blood
20 chr22:30083200-30090000 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr22:30083400-30089000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr22:30084000-30089400 Enhancers iPS-15b Cell Line embryonic stem cell
23 chr22:30084000-30090000 Weak transcription Aorta Aorta
24 chr22:30084200-30088800 Enhancers H1 Cell Line embryonic stem cell
25 chr22:30084400-30088600 Weak transcription Left Ventricle heart
26 chr22:30084400-30089000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr22:30084400-30089000 Weak transcription HUVEC blood vessel
28 chr22:30084400-30089600 Weak transcription HMEC breast
29 chr22:30084400-30090400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr22:30084600-30088600 Weak transcription Gastric stomach
31 chr22:30084600-30089000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr22:30084600-30089800 Weak transcription Primary hematopoietic stem cells blood
33 chr22:30085000-30089000 Enhancers HUES6 Cell Line embryonic stem cell
34 chr22:30085200-30088800 Strong transcription NHEK skin
35 chr22:30085600-30092000 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr22:30085600-30094000 Strong transcription Primary T helper cells PMA-I stimulated --
37 chr22:30085800-30089000 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr22:30085800-30089200 Enhancers iPS-20b Cell Line embryonic stem cell
39 chr22:30085800-30089200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
40 chr22:30085800-30095000 Strong transcription Dnd41 blood
41 chr22:30085800-30096200 Weak transcription Fetal Kidney kidney
42 chr22:30086000-30089800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr22:30086000-30090000 Weak transcription Fetal Lung lung
44 chr22:30086000-30090000 Weak transcription Osteobl bone
45 chr22:30086000-30091800 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr22:30086000-30092600 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
47 chr22:30086200-30090000 Genic enhancers Adipose Nuclei Adipose
48 chr22:30086200-30090800 Weak transcription Brain Inferior Temporal Lobe brain
49 chr22:30086400-30089200 Weak transcription Rectal Smooth Muscle rectum
50 chr22:30086400-30091400 Weak transcription Brain Substantia Nigra brain

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