Variant report

Variant rs529768779
Chromosome Location chr21:45721508-45721509
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:45720400-45721600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
2 chr21:45720400-45721800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
3 chr21:45720400-45721800 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
4 chr21:45720600-45721600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr21:45720600-45721600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr21:45720600-45721600 Flanking Active TSS Adipose Nuclei Adipose
7 chr21:45720600-45721800 Flanking Active TSS Primary B cells from peripheral blood blood
8 chr21:45720600-45721800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
9 chr21:45720600-45721800 Flanking Active TSS Dnd41 blood
10 chr21:45720600-45722200 Flanking Active TSS Brain Germinal Matrix brain
11 chr21:45720600-45722200 Flanking Active TSS Stomach Smooth Muscle stomach
12 chr21:45720600-45722600 Flanking Active TSS Duodenum Mucosa Duodenum
13 chr21:45720600-45724800 Enhancers Fetal Heart heart
14 chr21:45720800-45721600 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
15 chr21:45720800-45721600 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
16 chr21:45720800-45721600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
17 chr21:45720800-45721600 Transcr. at gene 5' and 3' Fetal Stomach stomach
18 chr21:45720800-45721600 Flanking Active TSS Hela-S3 cervix
19 chr21:45720800-45722400 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
20 chr21:45720800-45722600 Flanking Active TSS Duodenum Smooth Muscle Duodenum
21 chr21:45720800-45722600 Flanking Active TSS Fetal Intestine Large intestine
22 chr21:45720800-45722600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
23 chr21:45720800-45722800 Flanking Active TSS Colonic Mucosa Colon
24 chr21:45720800-45722800 Flanking Active TSS Rectal Mucosa Donor 29 rectum
25 chr21:45720800-45722800 Flanking Active TSS GM12878-XiMat blood
26 chr21:45720800-45731000 Weak transcription Aorta Aorta
27 chr21:45721000-45721600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
28 chr21:45721000-45721600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr21:45721000-45721600 Flanking Active TSS HMEC breast
30 chr21:45721000-45722000 Enhancers Ovary ovary
31 chr21:45721000-45722000 Enhancers Spleen Spleen
32 chr21:45721000-45722200 Enhancers Thymus Thymus
33 chr21:45721000-45722400 Enhancers Fetal Brain Male brain
34 chr21:45721000-45722600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
35 chr21:45721000-45722600 Enhancers Fetal Lung lung
36 chr21:45721000-45722600 Enhancers Fetal Thymus thymus
37 chr21:45721000-45722600 Enhancers Psoas Muscle Psoas
38 chr21:45721000-45722800 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr21:45721000-45723000 Enhancers Primary mononuclear cells fromperipheralblood Blood
40 chr21:45721000-45723000 Enhancers Lung lung
41 chr21:45721000-45723000 Flanking Active TSS HepG2 liver
42 chr21:45721000-45723400 Weak transcription ES-I3 Cell Line embryonic stem cell
43 chr21:45721000-45723400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr21:45721000-45725000 Enhancers Primary T helper naive cells from peripheral blood blood
45 chr21:45721000-45725000 Enhancers Primary T killer naive cells fromperipheralblood blood
46 chr21:45721000-45725600 Enhancers Liver Liver
47 chr21:45721000-45725600 Enhancers Left Ventricle heart
48 chr21:45721000-45726200 Enhancers Pancreas Pancrea
49 chr21:45721000-45727000 Weak transcription H9 Cell Line embryonic stem cell
50 chr21:45721000-45757600 Weak transcription Pancreatic Islets Pancreatic Islet

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