Variant report

Variant	rs529802869
Chromosome Location	chr8:49173998-49173999
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831310	chr8:49080177-49256440	Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv831311	chr8:49106160-49290209	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	esv1808901	chr8:49173411-49201882	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49168000-49174000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr8:49172800-49175200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
3	chr8:49173000-49174200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr8:49173000-49175200	Enhancers	H1 Cell Line	embryonic stem cell
5	chr8:49173200-49175000	Enhancers	Adipose Nuclei	Adipose
6	chr8:49173200-49175200	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr8:49173200-49178800	Weak transcription	Spleen	Spleen
8	chr8:49173200-49182000	Weak transcription	Esophagus	oesophagus
9	chr8:49173400-49174000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
10	chr8:49173400-49174800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr8:49173400-49175000	Enhancers	iPS-20b Cell Line	embryonic stem cell
12	chr8:49173400-49175000	Enhancers	Fetal Stomach	stomach
13	chr8:49173400-49175200	Enhancers	H9 Cell Line	embryonic stem cell
14	chr8:49173400-49175200	Enhancers	HUES48 Cell Line	embryonic stem cell
15	chr8:49173400-49175200	Enhancers	iPS-18 Cell Line	embryonic stem cell
16	chr8:49173400-49175400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr8:49173400-49175400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr8:49173400-49175800	Enhancers	iPS-15b Cell Line	embryonic stem cell
19	chr8:49173400-49186400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
20	chr8:49173600-49174200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
21	chr8:49173600-49174200	Enhancers	HUES64 Cell Line	embryonic stem cell
22	chr8:49173600-49175200	Enhancers	ES-I3 Cell Line	embryonic stem cell
23	chr8:49173800-49174200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
24	chr8:49173800-49174200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr8:49173800-49174200	Enhancers	Right Atrium	heart
26	chr8:49173800-49174400	Enhancers	Fetal Muscle Trunk	muscle
27	chr8:49173800-49174400	Enhancers	HSMMtube	muscle
28	chr8:49173800-49175000	Enhancers	Fetal Muscle Leg	muscle
29	chr8:49173800-49175200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr8:49173800-49176600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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