The 2.0 version of rSNPBase

Variant report

Variant rs529805767
Chromosome Location chr1:213355773-213355774
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213301000-213371000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:213301000-213374800 Weak transcription HSMM muscle
3 chr1:213302600-213358200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr1:213310000-213370400 Weak transcription Duodenum Mucosa Duodenum
5 chr1:213325200-213359600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr1:213326600-213422200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr1:213328000-213358200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr1:213328200-213387200 Weak transcription Spleen Spleen
9 chr1:213328600-213360200 Weak transcription K562 blood
10 chr1:213330600-213357200 Weak transcription Dnd41 blood
11 chr1:213333000-213359800 Weak transcription Fetal Lung lung
12 chr1:213336600-213355800 Weak transcription NH-A brain
13 chr1:213336600-213357400 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr1:213336800-213361200 Weak transcription NHDF-Ad bronchial
15 chr1:213337400-213359800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr1:213337800-213374400 Weak transcription Muscle Satellite Cultured Cells --
17 chr1:213338200-213360200 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr1:213338400-213360200 Weak transcription Small Intestine intestine
19 chr1:213340200-213359600 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr1:213340600-213358600 Weak transcription Psoas Muscle Psoas
21 chr1:213340600-213359800 Weak transcription Right Ventricle heart
22 chr1:213340600-213424600 Weak transcription Pancreas Pancrea
23 chr1:213340800-213360200 Weak transcription Aorta Aorta
24 chr1:213341400-213358200 Weak transcription Primary T regulatory cells fromperipheralblood blood
25 chr1:213343600-213359600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr1:213344200-213360200 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr1:213344600-213359800 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr1:213345600-213358600 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr1:213345600-213404600 Weak transcription Osteobl bone
30 chr1:213346200-213356000 Weak transcription Brain Substantia Nigra brain
31 chr1:213346200-213358600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr1:213346200-213387400 Weak transcription Gastric stomach
33 chr1:213346400-213356400 Weak transcription Liver Liver
34 chr1:213346400-213360200 Weak transcription Ovary ovary
35 chr1:213346600-213357000 Weak transcription Primary B cells from peripheral blood blood
36 chr1:213346800-213359200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr1:213347000-213356000 Weak transcription Fetal Brain Male brain
38 chr1:213347200-213358600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr1:213347400-213359600 Weak transcription Stomach Smooth Muscle stomach
40 chr1:213348400-213358000 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr1:213350000-213359400 Weak transcription HUES6 Cell Line embryonic stem cell
42 chr1:213350200-213357800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr1:213350400-213357800 Weak transcription Brain Inferior Temporal Lobe brain
44 chr1:213350400-213358200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr1:213350400-213359000 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr1:213350400-213359000 Weak transcription A549 lung
47 chr1:213350400-213359200 Weak transcription Colon Smooth Muscle Colon
48 chr1:213350400-213359600 Weak transcription ES-I3 Cell Line embryonic stem cell
49 chr1:213350400-213359800 Weak transcription Adipose Nuclei Adipose
50 chr1:213350400-213383200 Weak transcription Placenta Placenta

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Last update: Aug 31, 2015