The 2.0 version of rSNPBase

Variant report

Variant rs529808118
Chromosome Location chr6:30183460-30183461
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:30182600-30183600 Weak transcription Primary T regulatory cells fromperipheralblood blood
2 chr6:30182600-30183800 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr6:30182600-30183800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr6:30182600-30183800 Weak transcription NHLF lung
5 chr6:30182600-30184400 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr6:30182600-30184600 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr6:30182600-30185600 Weak transcription Primary hematopoietic stem cells short term culture blood
8 chr6:30182600-30186800 Weak transcription Brain Inferior Temporal Lobe brain
9 chr6:30182600-30187000 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr6:30182600-30187000 Weak transcription Primary T helper cells PMA-I stimulated --
11 chr6:30182600-30187000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr6:30182600-30187000 Weak transcription Brain Angular Gyrus brain
13 chr6:30182600-30187000 Weak transcription Fetal Thymus thymus
14 chr6:30182600-30187200 Weak transcription Primary hematopoietic stem cells blood
15 chr6:30182600-30187200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr6:30182600-30187200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr6:30182600-30187200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr6:30182600-30187200 Weak transcription Adipose Nuclei Adipose
19 chr6:30182600-30187200 Weak transcription Brain Cingulate Gyrus brain
20 chr6:30182600-30187200 Weak transcription Brain Hippocampus Middle brain
21 chr6:30182600-30187200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr6:30182600-30187200 Weak transcription Colon Smooth Muscle Colon
23 chr6:30182600-30187200 Weak transcription Stomach Mucosa stomach
24 chr6:30182600-30189200 Weak transcription Right Atrium heart
25 chr6:30182800-30184200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
26 chr6:30182800-30184600 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr6:30182800-30186400 Weak transcription HepG2 liver
28 chr6:30182800-30186800 Weak transcription Primary T killer naive cells fromperipheralblood blood
29 chr6:30182800-30186800 Weak transcription Duodenum Mucosa Duodenum
30 chr6:30182800-30186800 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr6:30182800-30187000 Weak transcription Primary T cells fromperipheralblood blood
32 chr6:30182800-30187000 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr6:30182800-30187200 Weak transcription Primary neutrophils fromperipheralblood blood
34 chr6:30182800-30187200 Weak transcription Fetal Intestine Large intestine
35 chr6:30182800-30187200 Weak transcription Monocytes-CD14+_RO01746 blood
36 chr6:30183200-30183600 Enhancers HSMMtube muscle
37 chr6:30183200-30184000 Weak transcription Primary B cells from peripheral blood blood
38 chr6:30183200-30186600 Weak transcription Liver Liver
39 chr6:30183200-30187000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr6:30183400-30184000 Enhancers GM12878-XiMat blood

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Last update: Aug 31, 2015