The 2.0 version of rSNPBase

Variant report

Variant rs529843623
Chromosome Location chr6:121557566-121557567
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:121509600-121575400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr6:121516000-121560200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr6:121533000-121566800 Weak transcription Stomach Mucosa stomach
4 chr6:121535000-121569200 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr6:121536200-121567200 Weak transcription Primary T helper cells fromperipheralblood blood
6 chr6:121536600-121558400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr6:121536600-121566000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr6:121536600-121568200 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr6:121536600-121585400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr6:121536800-121565600 Weak transcription Primary T cells fromperipheralblood blood
11 chr6:121536800-121566000 Weak transcription Duodenum Mucosa Duodenum
12 chr6:121536800-121566000 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr6:121536800-121566000 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr6:121536800-121584400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr6:121537000-121584600 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr6:121537200-121562400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr6:121537400-121567800 Weak transcription Primary T regulatory cells fromperipheralblood blood
18 chr6:121538200-121565800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr6:121538200-121567000 Weak transcription Primary B cells from peripheral blood blood
20 chr6:121539200-121567600 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr6:121539400-121562200 Weak transcription Fetal Kidney kidney
22 chr6:121539400-121563200 Weak transcription Brain Substantia Nigra brain
23 chr6:121540400-121567800 Weak transcription Adipose Nuclei Adipose
24 chr6:121541200-121585000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr6:121544400-121581600 Weak transcription HSMM muscle
26 chr6:121544800-121581400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr6:121552600-121561800 Weak transcription Fetal Brain Male brain
28 chr6:121552600-121569200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr6:121552800-121566000 Weak transcription Gastric stomach
30 chr6:121552800-121567800 Weak transcription Rectal Smooth Muscle rectum
31 chr6:121553200-121559000 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr6:121553800-121557800 Weak transcription Fetal Thymus thymus
33 chr6:121554200-121568000 Weak transcription Brain Inferior Temporal Lobe brain
34 chr6:121554800-121567000 Weak transcription Placenta Placenta
35 chr6:121555000-121567200 Weak transcription Colonic Mucosa Colon
36 chr6:121555200-121557600 Weak transcription A549 lung
37 chr6:121555600-121558000 Weak transcription Fetal Brain Female brain
38 chr6:121555600-121567600 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr6:121555600-121568000 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr6:121556000-121557800 Strong transcription Dnd41 blood
41 chr6:121556200-121557800 Strong transcription Primary B cells from cord blood blood
42 chr6:121556600-121581800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr6:121556800-121558400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr6:121556800-121560600 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr6:121556800-121566000 Weak transcription Fetal Muscle Leg muscle
46 chr6:121556800-121567200 Weak transcription Thymus Thymus
47 chr6:121556800-121581600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr6:121557000-121558600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr6:121557000-121558800 Weak transcription Brain Hippocampus Middle brain
50 chr6:121557000-121559200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015