Variant report

Variant	rs529980300
Chromosome Location	chr9:94456207-94456208
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1045332	chr9:94352661-94656016	Active TSS Bivalent Enhancer Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1047426	chr9:94363211-94758114	Weak transcription Bivalent Enhancer Active TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
3	nsv531631	chr9:94373847-94633213	Weak transcription Enhancers Bivalent Enhancer Strong transcription Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
4	nsv982647	chr9:94456202-94474602	Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Weak transcription Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:94444200-94461400	Weak transcription	Right Atrium	heart
2	chr9:94450600-94457600	Weak transcription	Gastric	stomach
3	chr9:94451600-94457600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr9:94453200-94457600	Weak transcription	Pancreas	Pancrea
5	chr9:94453400-94463600	Weak transcription	Fetal Stomach	stomach
6	chr9:94454000-94468200	Weak transcription	Stomach Smooth Muscle	stomach
7	chr9:94455200-94456600	Genic enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr9:94455200-94456800	Enhancers	HUES6 Cell Line	embryonic stem cell
9	chr9:94455200-94457000	Enhancers	iPS-18 Cell Line	embryonic stem cell
10	chr9:94455400-94456400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr9:94455400-94456400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr9:94455400-94457200	Enhancers	iPS-15b Cell Line	embryonic stem cell
13	chr9:94455600-94456400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr9:94455600-94456800	Enhancers	H9 Cell Line	embryonic stem cell
15	chr9:94455600-94456800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
16	chr9:94455800-94456600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
17	chr9:94455800-94457200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
18	chr9:94456000-94456400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
19	chr9:94456000-94456400	Enhancers	Placenta Amnion	Placenta Amnion
20	chr9:94456000-94456600	Enhancers	ES-I3 Cell Line	embryonic stem cell
21	chr9:94456000-94456800	Enhancers	H1 Cell Line	embryonic stem cell
22	chr9:94456000-94456800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
23	chr9:94456000-94457000	Enhancers	iPS-20b Cell Line	embryonic stem cell
24	chr9:94456200-94457600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr9:94456200-94457600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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