Variant report

Variant rs529990833
Chromosome Location chr1:95086139-95086140
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95065600-95087200 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr1:95075200-95088400 Weak transcription Fetal Lung lung
3 chr1:95080800-95086800 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:95082400-95086200 Weak transcription Fetal Heart heart
5 chr1:95082600-95088200 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr1:95082800-95088200 Weak transcription HUES64 Cell Line embryonic stem cell
7 chr1:95083000-95087600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:95083000-95087800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr1:95083200-95086400 Weak transcription A549 lung
10 chr1:95083400-95086200 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr1:95083400-95086200 Weak transcription Small Intestine intestine
12 chr1:95083400-95087000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr1:95083400-95088600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr1:95083800-95086400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr1:95083800-95086800 Weak transcription NHLF lung
16 chr1:95083800-95087200 Weak transcription Osteobl bone
17 chr1:95083800-95088600 Weak transcription Muscle Satellite Cultured Cells --
18 chr1:95084000-95086400 Weak transcription Colonic Mucosa Colon
19 chr1:95084000-95086600 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr1:95084000-95086800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr1:95084000-95086800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr1:95084000-95087000 Weak transcription HepG2 liver
23 chr1:95084000-95087600 Weak transcription NHDF-Ad bronchial
24 chr1:95084000-95088200 Weak transcription H9 Cell Line embryonic stem cell
25 chr1:95084800-95090200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:95085000-95086200 Enhancers NHEK skin
27 chr1:95085000-95090200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr1:95085000-95090600 Enhancers HMEC breast
29 chr1:95085200-95086800 Enhancers Hela-S3 cervix
30 chr1:95085200-95087200 Enhancers Gastric stomach
31 chr1:95085200-95087200 Enhancers Lung lung
32 chr1:95085200-95087800 Enhancers Pancreas Pancrea
33 chr1:95085200-95087800 Enhancers Rectal Mucosa Donor 31 rectum
34 chr1:95085200-95089600 Enhancers Fetal Intestine Small intestine
35 chr1:95085200-95089800 Enhancers Breast Myoepithelial Primary Cells Breast
36 chr1:95085200-95090000 Enhancers NH-A brain
37 chr1:95085200-95090600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr1:95085200-95090600 Enhancers Placenta Amnion Placenta Amnion
39 chr1:95085200-95090800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr1:95085400-95090000 Enhancers Stomach Mucosa stomach
41 chr1:95085600-95088200 Weak transcription iPS-15b Cell Line embryonic stem cell
42 chr1:95085800-95086400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr1:95085800-95086400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr1:95085800-95087000 Weak transcription HSMM muscle
45 chr1:95085800-95087400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr1:95085800-95087800 Enhancers Duodenum Mucosa Duodenum
47 chr1:95085800-95089200 Enhancers Esophagus oesophagus
48 chr1:95085800-95089800 Enhancers Fetal Intestine Large intestine
49 chr1:95086000-95086200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
50 chr1:95086000-95087200 Enhancers Duodenum Smooth Muscle Duodenum

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