Variant report

Variant	rs530023201
Chromosome Location	chr8:49297220-49297221
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-UBE2V2-3	chr8:49297150-49297609	NONHSAT126477

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv981936	chr8:49296803-49297710	Strong transcription Weak transcription ZNF genes & repeats Enhancers Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49293800-49303000	Weak transcription	Aorta	Aorta
2	chr8:49294600-49308400	Weak transcription	Fetal Lung	lung
3	chr8:49294800-49297400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
4	chr8:49294800-49302400	Weak transcription	HSMMtube	muscle
5	chr8:49294800-49308800	Weak transcription	NHLF	lung
6	chr8:49294800-49309600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr8:49295000-49298200	Strong transcription	Placenta Amnion	Placenta Amnion
8	chr8:49295000-49309000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr8:49296000-49299600	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr8:49296200-49297800	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr8:49296400-49297800	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr8:49296400-49297800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr8:49296400-49297800	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
14	chr8:49296600-49297800	Strong transcription	NHDF-Ad	bronchial
15	chr8:49296600-49297800	Strong transcription	Osteobl	bone
16	chr8:49296800-49297600	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr8:49297000-49297600	Genic enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
18	chr8:49297000-49297800	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
19	chr8:49297000-49297800	ZNF genes & repeats	Fetal Stomach	stomach
20	chr8:49297200-49302200	Weak transcription	Muscle Satellite Cultured Cells	--

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