Variant report

Variant rs530023950
Chromosome Location chr9:139860988-139860989
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:139852000-139862000 Enhancers Primary Natural Killer cells fromperipheralblood blood
2 chr9:139855200-139861000 Enhancers Spleen Spleen
3 chr9:139856800-139861800 Enhancers Primary T helper cells fromperipheralblood blood
4 chr9:139858600-139861000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
5 chr9:139859200-139864800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr9:139859400-139867800 Weak transcription A549 lung
7 chr9:139859600-139861000 Enhancers Hela-S3 cervix
8 chr9:139859600-139869600 Weak transcription Gastric stomach
9 chr9:139860000-139861000 Enhancers Primary B cells from peripheral blood blood
10 chr9:139860000-139861000 Enhancers Left Ventricle heart
11 chr9:139860000-139861000 Enhancers Right Ventricle heart
12 chr9:139860200-139861000 Bivalent Enhancer ES-I3 Cell Line embryonic stem cell
13 chr9:139860200-139861000 Enhancers HUES6 Cell Line embryonic stem cell
14 chr9:139860200-139861000 Enhancers iPS-15b Cell Line embryonic stem cell
15 chr9:139860200-139861000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
16 chr9:139860200-139861000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
17 chr9:139860200-139861000 Bivalent Enhancer Primary monocytes fromperipheralblood blood
18 chr9:139860200-139861000 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
19 chr9:139860200-139861000 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
20 chr9:139860200-139861000 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
21 chr9:139860200-139861000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr9:139860200-139861000 Flanking Active TSS Brain Substantia Nigra brain
23 chr9:139860200-139861000 Bivalent Enhancer Fetal Muscle Trunk muscle
24 chr9:139860200-139861000 Bivalent Enhancer Fetal Muscle Leg muscle
25 chr9:139860200-139861000 Bivalent Enhancer Fetal Stomach stomach
26 chr9:139860200-139861000 Enhancers GM12878-XiMat blood
27 chr9:139860200-139861200 Enhancers Primary T cells from cord blood blood
28 chr9:139860400-139861000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr9:139860400-139861000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
30 chr9:139860400-139861000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr9:139860400-139861000 Enhancers Breast Myoepithelial Primary Cells Breast
32 chr9:139860400-139861000 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
33 chr9:139860400-139861000 Flanking Bivalent TSS/Enh Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr9:139860400-139861000 Enhancers Cortex derived primary cultured neurospheres brain
35 chr9:139860400-139861000 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
36 chr9:139860400-139861000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
37 chr9:139860400-139861000 Flanking Active TSS Brain Anterior Caudate brain
38 chr9:139860400-139861000 Enhancers Fetal Heart heart
39 chr9:139860400-139861000 Bivalent Enhancer HepG2 liver
40 chr9:139860400-139861200 Enhancers H1 Cell Line embryonic stem cell
41 chr9:139860600-139861000 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr9:139860600-139861000 Enhancers HUES48 Cell Line embryonic stem cell
43 chr9:139860600-139861000 Flanking Bivalent TSS/Enh IMR90 fetal lung fibroblasts Cell Line lung
44 chr9:139860600-139861000 Enhancers Primary hematopoietic stem cells blood
45 chr9:139860600-139861000 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
46 chr9:139860600-139861000 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr9:139860600-139861000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
48 chr9:139860600-139861000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
49 chr9:139860600-139861000 Enhancers Primary mononuclear cells fromperipheralblood Blood
50 chr9:139860600-139861000 Flanking Active TSS Brain Cingulate Gyrus brain

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