Variant report

Variant	rs530031152
Chromosome Location	chr6:147425838-147425839
allele	-/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:147415331..147417181-chr6:147425131..147427562,2	K562	blood:
2	chr6:147420322..147423479-chr6:147424445..147428438,5	K562	blood:
3	chr6:147419431..147422088-chr6:147424854..147426764,2	MCF-7	breast:
4	chr6:147420588..147422113-chr6:147425783..147427483,2	K562	blood:
5	chr6:147424959..147428934-chr6:147429472..147432018,4	MCF-7	breast:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1019245	chr6:147350834-147609776	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
2	nsv538467	chr6:147350834-147609776	Weak transcription Flanking Active TSS Genic enhancers Enhancers Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
3	nsv886751	chr6:147354092-147490398	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
4	nsv522096	chr6:147424880-147443480	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:147421800-147427800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr6:147422000-147427800	Weak transcription	Osteobl	bone
3	chr6:147422000-147428000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr6:147423800-147426000	Enhancers	Primary T cells from cord blood	blood
5	chr6:147424400-147426400	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr6:147424600-147426400	Enhancers	Primary neutrophils fromperipheralblood	blood
7	chr6:147424800-147429400	Weak transcription	Primary T cells fromperipheralblood	blood
8	chr6:147425200-147429800	Weak transcription	Fetal Thymus	thymus
9	chr6:147425200-147430600	Weak transcription	Dnd41	blood
10	chr6:147425400-147428000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
11	chr6:147425600-147426400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
12	chr6:147425600-147428000	Weak transcription	Primary T helper cells fromperipheralblood	blood
13	chr6:147425600-147428200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
14	chr6:147425800-147427800	Weak transcription	Primary monocytes fromperipheralblood	blood
15	chr6:147425800-147427800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
16	chr6:147425800-147428000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
17	chr6:147425800-147428000	Weak transcription	Primary T helper cells PMA-I stimulated	--
18	chr6:147425800-147428000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
19	chr6:147425800-147428000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
20	chr6:147425800-147428200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
21	chr6:147425800-147428200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
22	chr6:147425800-147429600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
23	chr6:147425800-147430000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood

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