Variant report

Variant	rs530117423
Chromosome Location	chr19:41626010-41626011
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1065684	chr19:41516389-41644542	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	esv3374785	chr19:41624912-41629210	Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:41620600-41627800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr19:41622600-41627000	Weak transcription	Pancreas	Pancrea
3	chr19:41624800-41626400	Enhancers	Primary T cells fromperipheralblood	blood
4	chr19:41624800-41628000	Enhancers	Primary T helper naive cells from peripheral blood	blood
5	chr19:41625600-41626200	Enhancers	Primary T killer memory cells from peripheral blood	blood
6	chr19:41625600-41629200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
7	chr19:41625800-41627000	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
8	chr19:41625800-41627400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
9	chr19:41625800-41627400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
10	chr19:41625800-41627600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
11	chr19:41625800-41627600	Enhancers	Primary T helper cells fromperipheralblood	blood
12	chr19:41626000-41626200	Bivalent Enhancer	Skeletal Muscle Male	skeletal muscle
13	chr19:41626000-41627000	Enhancers	Primary T helper cells PMA-I stimulated	--
14	chr19:41626000-41627400	Enhancers	Primary T cells from cord blood	blood
15	chr19:41626000-41627400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
16	chr19:41626000-41627400	Enhancers	Primary mononuclear cells fromperipheralblood	Blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links