The 2.0 version of rSNPBase

Variant report

Variant rs530134664
Chromosome Location chr1:10249916-10249917
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10231200-10251600 Weak transcription Right Atrium heart
2 chr1:10233200-10258200 Weak transcription Hela-S3 cervix
3 chr1:10236400-10258200 Weak transcription HSMM muscle
4 chr1:10240000-10255400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr1:10240400-10250000 Weak transcription Fetal Brain Male brain
6 chr1:10241000-10252200 Weak transcription HepG2 liver
7 chr1:10241000-10252400 Weak transcription Placenta Amnion Placenta Amnion
8 chr1:10241000-10254000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr1:10241000-10254200 Weak transcription Brain Anterior Caudate brain
10 chr1:10241000-10254200 Weak transcription Brain Hippocampus Middle brain
11 chr1:10241000-10254200 Weak transcription Colon Smooth Muscle Colon
12 chr1:10241000-10254600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr1:10241000-10255600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr1:10241000-10257200 Weak transcription Ovary ovary
15 chr1:10241000-10258000 Weak transcription Psoas Muscle Psoas
16 chr1:10241200-10254000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr1:10241200-10254200 Weak transcription Brain Cingulate Gyrus brain
18 chr1:10241200-10254200 Weak transcription Brain Inferior Temporal Lobe brain
19 chr1:10241200-10259000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr1:10241400-10253400 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr1:10241400-10255600 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr1:10241600-10251600 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr1:10241600-10254000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr1:10241600-10254000 Weak transcription Osteobl bone
25 chr1:10241800-10250400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr1:10241800-10254000 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr1:10244200-10256800 Weak transcription Fetal Stomach stomach
28 chr1:10247000-10252400 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr1:10247200-10252400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr1:10247200-10254200 Weak transcription Fetal Kidney kidney
31 chr1:10247200-10255400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr1:10248800-10253400 Weak transcription Fetal Muscle Leg muscle
33 chr1:10249400-10250000 Enhancers Fetal Muscle Trunk muscle
34 chr1:10249600-10250200 Enhancers GM12878-XiMat blood
35 chr1:10249800-10250000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
36 chr1:10249800-10250000 Enhancers Primary monocytes fromperipheralblood blood
37 chr1:10249800-10250000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
38 chr1:10249800-10250000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr1:10249800-10250000 Flanking Active TSS HSMMtube muscle
40 chr1:10249800-10250000 Enhancers Monocytes-CD14+_RO01746 blood
41 chr1:10249800-10250200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
42 chr1:10249800-10250200 Enhancers Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015