Variant report

Variant	rs530193916
Chromosome Location	chr11:66981832-66981833
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531397	chr11:66653381-67465721	Active TSS Enhancers Strong transcription Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	271 gene(s)	inside rSNPs	diseases
2	nsv532287	chr11:66784014-67023899	Weak transcription Strong transcription Bivalent Enhancer Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
3	nsv972951	chr11:66980475-66986736	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	nsv825958	chr11:66980849-66982759	Strong transcription Weak transcription Genic enhancers Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:66930800-66985600	Weak transcription	Small Intestine	intestine
2	chr11:66936400-67006200	Weak transcription	Stomach Mucosa	stomach
3	chr11:66942600-66982800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
4	chr11:66945800-66984800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr11:66948200-66986400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr11:66951200-66986600	Weak transcription	Fetal Brain Male	brain
7	chr11:66953400-66982800	Weak transcription	Aorta	Aorta
8	chr11:66953400-66982800	Weak transcription	Brain Cingulate Gyrus	brain
9	chr11:66953800-66982800	Weak transcription	HUVEC	blood vessel
10	chr11:66954000-66984800	Weak transcription	Rectal Smooth Muscle	rectum
11	chr11:66954600-66993000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr11:66956400-67005000	Weak transcription	Fetal Heart	heart
13	chr11:66962200-66999000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr11:66962400-66982800	Weak transcription	Brain Inferior Temporal Lobe	brain
15	chr11:66962600-66995000	Weak transcription	Psoas Muscle	Psoas
16	chr11:66964000-66982800	Weak transcription	NHEK	skin
17	chr11:66964400-66989400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
18	chr11:66964600-67002400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
19	chr11:66965200-67006400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
20	chr11:66965400-66982800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
21	chr11:66966400-66989400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
22	chr11:66968200-66982800	Weak transcription	H9 Cell Line	embryonic stem cell
23	chr11:66970400-66988800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
24	chr11:66971400-66989200	Strong transcription	Placenta	Placenta
25	chr11:66972400-66989600	Strong transcription	Primary T cells fromperipheralblood	blood
26	chr11:66972600-66987800	Strong transcription	Fetal Stomach	stomach
27	chr11:66972600-66989000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr11:66972800-66987600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
29	chr11:66972800-66988400	Strong transcription	Fetal Intestine Large	intestine
30	chr11:66972800-67002600	Strong transcription	Fetal Muscle Trunk	muscle
31	chr11:66973000-66989200	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
32	chr11:66973000-67005400	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr11:66973400-66988200	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
34	chr11:66973600-66982200	Weak transcription	NHDF-Ad	bronchial
35	chr11:66973800-66987800	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
36	chr11:66974400-66988000	Strong transcription	HepG2	liver
37	chr11:66974400-66988200	Strong transcription	HUES64 Cell Line	embryonic stem cell
38	chr11:66974400-66989000	Strong transcription	Primary T helper cells fromperipheralblood	blood
39	chr11:66974600-66989400	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
40	chr11:66974600-66993000	Strong transcription	Dnd41	blood
41	chr11:66974600-66993200	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
42	chr11:66974600-66993400	Strong transcription	HUES48 Cell Line	embryonic stem cell
43	chr11:66974800-66997600	Strong transcription	Fetal Thymus	thymus
44	chr11:66975000-66983800	Strong transcription	Left Ventricle	heart
45	chr11:66975000-66989400	Strong transcription	Fetal Muscle Leg	muscle
46	chr11:66975000-66993200	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
47	chr11:66975400-66982200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
48	chr11:66975400-66982200	Weak transcription	Fetal Kidney	kidney
49	chr11:66975400-66982800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
50	chr11:66975400-66983200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood

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