Variant report

Variant rs530220497
Chromosome Location chr11:65340444-65340445
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:65336600-65340800 Active TSS H9 Cell Line embryonic stem cell
2 chr11:65338000-65341600 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell
3 chr11:65338000-65345600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr11:65338800-65341400 Active TSS Fetal Kidney kidney
5 chr11:65338800-65344200 Active TSS Pancreatic Islets Pancreatic Islet
6 chr11:65339400-65340600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
7 chr11:65339400-65340800 Active TSS HUES48 Cell Line embryonic stem cell
8 chr11:65339400-65340800 Active TSS Psoas Muscle Psoas
9 chr11:65339400-65342200 Active TSS Ovary ovary
10 chr11:65339600-65340600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr11:65339600-65340600 Active TSS Brain Germinal Matrix brain
12 chr11:65339600-65340600 Active TSS Placenta Amnion Placenta Amnion
13 chr11:65339600-65340600 Active TSS A549 lung
14 chr11:65339600-65340800 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr11:65339600-65340800 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr11:65339600-65340800 Active TSS Breast Myoepithelial Primary Cells Breast
17 chr11:65339600-65340800 Active TSS Muscle Satellite Cultured Cells --
18 chr11:65339600-65340800 Active TSS Right Atrium heart
19 chr11:65339600-65340800 Active TSS HSMMtube muscle
20 chr11:65339600-65341000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr11:65339600-65341000 Active TSS Fetal Brain Female brain
22 chr11:65339600-65341000 Active TSS HSMM muscle
23 chr11:65339800-65340600 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr11:65339800-65340600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr11:65339800-65340600 Active TSS HUES6 Cell Line embryonic stem cell
26 chr11:65339800-65340600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr11:65339800-65340600 Active TSS Primary T cells from cord blood blood
28 chr11:65339800-65340600 Active TSS Primary T helper memory cells from peripheral blood 1 blood
29 chr11:65339800-65340600 Active TSS Primary T helper cells PMA-I stimulated --
30 chr11:65339800-65340600 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr11:65339800-65340600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
32 chr11:65339800-65340600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr11:65339800-65340600 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
34 chr11:65339800-65340600 Active TSS Brain Angular Gyrus brain
35 chr11:65339800-65340600 Active TSS Brain Hippocampus Middle brain
36 chr11:65339800-65340600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
37 chr11:65339800-65340600 Active TSS Brain Substantia Nigra brain
38 chr11:65339800-65340600 Active TSS Colonic Mucosa Colon
39 chr11:65339800-65340600 Active TSS Duodenum Smooth Muscle Duodenum
40 chr11:65339800-65340600 Active TSS Fetal Intestine Small intestine
41 chr11:65339800-65340600 Active TSS Fetal Stomach stomach
42 chr11:65339800-65340600 Active TSS Rectal Mucosa Donor 31 rectum
43 chr11:65339800-65340600 Active TSS Rectal Smooth Muscle rectum
44 chr11:65339800-65340600 Active TSS Right Ventricle heart
45 chr11:65339800-65340600 Active TSS Skeletal Muscle Female skeletal muscle
46 chr11:65339800-65340600 Active TSS Stomach Smooth Muscle stomach
47 chr11:65339800-65340600 Active TSS Spleen Spleen
48 chr11:65339800-65340600 Active TSS GM12878-XiMat blood
49 chr11:65339800-65340600 Active TSS Hela-S3 cervix
50 chr11:65339800-65340600 Active TSS HepG2 liver

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