The 2.0 version of rSNPBase

Variant report

Variant rs530442664
Chromosome Location chr7:105460188-105460189
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:105430200-105479200 Weak transcription Aorta Aorta
2 chr7:105446400-105471200 Weak transcription Lung lung
3 chr7:105446800-105470000 Weak transcription iPS-20b Cell Line embryonic stem cell
4 chr7:105446800-105470200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr7:105446800-105471200 Weak transcription H9 Cell Line embryonic stem cell
6 chr7:105447000-105470000 Weak transcription Ovary ovary
7 chr7:105447200-105470200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr7:105447600-105470000 Weak transcription NH-A brain
9 chr7:105447800-105470600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr7:105448200-105460800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr7:105448600-105465000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr7:105448800-105463200 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr7:105448800-105470400 Weak transcription Fetal Muscle Leg muscle
14 chr7:105449000-105479200 Weak transcription Esophagus oesophagus
15 chr7:105450200-105466400 Weak transcription NHLF lung
16 chr7:105450400-105470200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr7:105450800-105463200 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr7:105450800-105470200 Weak transcription NHEK skin
19 chr7:105451200-105462600 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr7:105451600-105462000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
21 chr7:105452400-105464600 Weak transcription Fetal Intestine Large intestine
22 chr7:105452400-105467400 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr7:105452400-105471200 Weak transcription Duodenum Mucosa Duodenum
24 chr7:105452600-105470800 Weak transcription Small Intestine intestine
25 chr7:105452600-105471200 Weak transcription Right Ventricle heart
26 chr7:105452800-105465800 Weak transcription Liver Liver
27 chr7:105452800-105470400 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr7:105456200-105470200 Weak transcription H1 Cell Line embryonic stem cell
29 chr7:105456600-105467400 Weak transcription HUVEC blood vessel
30 chr7:105456600-105470000 Weak transcription HUES6 Cell Line embryonic stem cell
31 chr7:105456800-105462200 Weak transcription Primary T helper cells fromperipheralblood blood
32 chr7:105456800-105462400 Weak transcription Fetal Kidney kidney
33 chr7:105456800-105467200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr7:105457000-105460600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr7:105457000-105460600 Enhancers Placenta Placenta
36 chr7:105457200-105460600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr7:105457200-105463800 Weak transcription Rectal Smooth Muscle rectum
38 chr7:105457200-105478000 Weak transcription Brain Anterior Caudate brain
39 chr7:105457400-105460600 Weak transcription Gastric stomach
40 chr7:105457400-105461200 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr7:105457400-105461200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
42 chr7:105457400-105462400 Weak transcription Right Atrium heart
43 chr7:105457400-105468600 Weak transcription Spleen Spleen
44 chr7:105457400-105469800 Weak transcription Stomach Smooth Muscle stomach
45 chr7:105457400-105470000 Weak transcription HUES64 Cell Line embryonic stem cell
46 chr7:105457600-105465600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr7:105457800-105466200 Weak transcription Colon Smooth Muscle Colon
48 chr7:105457800-105469200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr7:105457800-105470000 Weak transcription iPS-15b Cell Line embryonic stem cell
50 chr7:105458000-105470000 Weak transcription HUES48 Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015