The 2.0 version of rSNPBase

Variant report

Variant rs530651005
Chromosome Location chr12:121310422-121310423
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:121288000-121311800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
2 chr12:121288000-121316600 Weak transcription NHLF lung
3 chr12:121288200-121339600 Weak transcription Hela-S3 cervix
4 chr12:121291600-121312400 Weak transcription Gastric stomach
5 chr12:121292000-121312400 Weak transcription Aorta Aorta
6 chr12:121294200-121340400 Weak transcription HSMM muscle
7 chr12:121295000-121311000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr12:121295000-121316200 Weak transcription HMEC breast
9 chr12:121296200-121311000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr12:121296600-121310800 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr12:121297400-121311800 Weak transcription Dnd41 blood
12 chr12:121297400-121339800 Weak transcription A549 lung
13 chr12:121297600-121315200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr12:121298400-121313600 Weak transcription Duodenum Mucosa Duodenum
15 chr12:121300600-121312400 Weak transcription H9 Cell Line embryonic stem cell
16 chr12:121300600-121328800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr12:121302000-121328800 Weak transcription Fetal Intestine Large intestine
18 chr12:121303400-121312400 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr12:121303600-121311000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr12:121303600-121312400 Weak transcription Primary T cells fromperipheralblood blood
21 chr12:121303600-121312400 Weak transcription Pancreas Pancrea
22 chr12:121303800-121312400 Weak transcription Lung lung
23 chr12:121304200-121310600 Weak transcription Brain Angular Gyrus brain
24 chr12:121304200-121329800 Weak transcription K562 blood
25 chr12:121304600-121310800 Weak transcription Primary T cells from cord blood blood
26 chr12:121304600-121311800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr12:121304600-121339800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr12:121304800-121312600 Weak transcription Stomach Mucosa stomach
29 chr12:121304800-121322000 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr12:121304800-121324200 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr12:121305000-121317400 Weak transcription Pancreatic Islets Pancreatic Islet
32 chr12:121305200-121310600 Weak transcription Liver Liver
33 chr12:121306000-121311400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr12:121306000-121312000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr12:121306000-121322800 Weak transcription Primary B cells from cord blood blood
36 chr12:121306200-121315000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr12:121306200-121319800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr12:121306600-121312400 Weak transcription GM12878-XiMat blood
39 chr12:121306600-121326600 Weak transcription Fetal Intestine Small intestine
40 chr12:121306600-121331400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr12:121308600-121310600 Enhancers Left Ventricle heart
42 chr12:121308600-121316200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr12:121308800-121316600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr12:121308800-121323200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr12:121309200-121310600 Enhancers Ovary ovary
46 chr12:121309200-121317000 Weak transcription NHEK skin
47 chr12:121309400-121310600 Genic enhancers Primary B cells from peripheral blood blood
48 chr12:121309400-121311400 Enhancers Brain Hippocampus Middle brain
49 chr12:121309400-121313200 Enhancers Primary monocytes fromperipheralblood blood
50 chr12:121309600-121311400 Enhancers Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015