| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1018015 |
chr5:58889470-59532667 |
Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
13 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv537766 |
chr5:58889470-59532667 |
Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
13 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1025856 |
chr5:59188419-59928852 |
Enhancers Strong transcription Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
20 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv462192 |
chr5:59360341-59474215 |
Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 5 |
nsv598260 |
chr5:59360341-59474215 |
Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 6 |
esv3442354 |
chr5:59444795-59446943 |
Enhancers ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved
Feedback
Last update: Aug 31, 2015