Variant report

Variant rs530710774
Chromosome Location chr6:29917066-29917067
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:29911200-29920200 Weak transcription A549 lung
2 chr6:29911200-29921400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr6:29911600-29920400 Weak transcription Fetal Brain Male brain
4 chr6:29911800-29917200 Strong transcription Fetal Stomach stomach
5 chr6:29911800-29917600 Strong transcription Fetal Intestine Large intestine
6 chr6:29912400-29917200 Genic enhancers Spleen Spleen
7 chr6:29912400-29918000 Strong transcription Fetal Intestine Small intestine
8 chr6:29912600-29921000 Weak transcription Psoas Muscle Psoas
9 chr6:29912800-29924200 Weak transcription Right Atrium heart
10 chr6:29913000-29917200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr6:29913000-29924000 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr6:29913000-29924200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr6:29913400-29917800 Strong transcription Breast Myoepithelial Primary Cells Breast
14 chr6:29913400-29917800 Weak transcription Hela-S3 cervix
15 chr6:29913400-29918800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr6:29913400-29919600 Weak transcription Fetal Muscle Trunk muscle
17 chr6:29913400-29920800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr6:29913400-29932200 Weak transcription Brain Anterior Caudate brain
19 chr6:29913400-29932600 Weak transcription Brain Substantia Nigra brain
20 chr6:29913600-29917200 Strong transcription Duodenum Mucosa Duodenum
21 chr6:29913600-29918800 Weak transcription Muscle Satellite Cultured Cells --
22 chr6:29913600-29919200 Weak transcription HUES64 Cell Line embryonic stem cell
23 chr6:29913600-29920400 Weak transcription HMEC breast
24 chr6:29913600-29921600 Weak transcription NHEK skin
25 chr6:29913600-29924400 Weak transcription H1 Cell Line embryonic stem cell
26 chr6:29913600-29925400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr6:29913800-29917200 Strong transcription Adipose Nuclei Adipose
28 chr6:29913800-29921000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr6:29913800-29932200 Weak transcription Small Intestine intestine
30 chr6:29914000-29917600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr6:29914000-29918000 Weak transcription iPS-18 Cell Line embryonic stem cell
32 chr6:29914000-29918200 Strong transcription Rectal Mucosa Donor 29 rectum
33 chr6:29914000-29918200 Strong transcription Thymus Thymus
34 chr6:29914000-29920600 Weak transcription NHLF lung
35 chr6:29914000-29921000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr6:29914000-29923800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr6:29914000-29924200 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr6:29914000-29932200 Weak transcription Colon Smooth Muscle Colon
39 chr6:29914200-29918000 Genic enhancers Primary T cells fromperipheralblood blood
40 chr6:29914200-29918000 Strong transcription Monocytes-CD14+_RO01746 blood
41 chr6:29914200-29918200 Strong transcription Primary monocytes fromperipheralblood blood
42 chr6:29914200-29919000 Strong transcription Primary B cells from cord blood blood
43 chr6:29914200-29919200 Weak transcription HUES48 Cell Line embryonic stem cell
44 chr6:29914200-29920800 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr6:29914400-29917200 Strong transcription Brain Hippocampus Middle brain
46 chr6:29914400-29917200 Weak transcription Dnd41 blood
47 chr6:29914400-29917800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr6:29914600-29920200 Weak transcription Osteobl bone
49 chr6:29914600-29932200 Weak transcription Colonic Mucosa Colon
50 chr6:29914800-29917200 Genic enhancers Primary T helper naive cells fromperipheralblood blood

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