Variant report

Variant	rs530734174
Chromosome Location	chr2:114727808-114727809
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:5)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:5 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr2:114719759..114722494-chr2:114725495..114728932,3	K562	blood:
2	chr2:114727758..114729745-chr2:114737971..114739817,2	K562	blood:
3	chr2:114722980..114724600-chr2:114727124..114729506,2	K562	blood:
4	chr2:114513167..114514852-chr2:114727452..114729703,2	K562	blood:
5	chr2:114719759..114724600-chr2:114725495..114731130,7	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SLC35F5-4	chr2:114727055-114728277	XLOC_002286

No data

Variant related genes	Relation type
ENSG00000115084	Chromatin interaction

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv275040	chr2:114725846-114729087	Strong transcription Genic enhancers Weak transcription Enhancers	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:99 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:114653600-114734800	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr2:114668400-114735000	Weak transcription	Stomach Mucosa	stomach
3	chr2:114705200-114731200	Weak transcription	Lung	lung
4	chr2:114705200-114733000	Weak transcription	Pancreas	Pancrea
5	chr2:114705200-114734200	Weak transcription	Right Ventricle	heart
6	chr2:114705200-114736000	Weak transcription	Gastric	stomach
7	chr2:114705200-114737600	Weak transcription	Esophagus	oesophagus
8	chr2:114706200-114731400	Weak transcription	Aorta	Aorta
9	chr2:114706200-114731400	Weak transcription	Spleen	Spleen
10	chr2:114709200-114731200	Weak transcription	Fetal Kidney	kidney
11	chr2:114710400-114728000	Weak transcription	Stomach Smooth Muscle	stomach
12	chr2:114710400-114735800	Weak transcription	Colonic Mucosa	Colon
13	chr2:114711200-114735400	Weak transcription	Fetal Lung	lung
14	chr2:114711800-114735400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
15	chr2:114713600-114732800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
16	chr2:114713800-114731400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr2:114713800-114732200	Weak transcription	Fetal Muscle Leg	muscle
18	chr2:114713800-114734600	Weak transcription	Fetal Muscle Trunk	muscle
19	chr2:114713800-114735200	Weak transcription	Ovary	ovary
20	chr2:114713800-114736200	Weak transcription	Fetal Stomach	stomach
21	chr2:114714400-114735200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
22	chr2:114714800-114732800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr2:114715000-114744000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
24	chr2:114715200-114728400	Weak transcription	Duodenum Mucosa	Duodenum
25	chr2:114715200-114735600	Weak transcription	Skeletal Muscle Female	skeletal muscle
26	chr2:114715600-114732800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
27	chr2:114715600-114734800	Weak transcription	Left Ventricle	heart
28	chr2:114715600-114735400	Weak transcription	K562	blood
29	chr2:114715600-114737000	Weak transcription	Duodenum Smooth Muscle	Duodenum
30	chr2:114716800-114729200	Weak transcription	Placenta	Placenta
31	chr2:114717600-114729400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
32	chr2:114718600-114729000	Weak transcription	Fetal Thymus	thymus
33	chr2:114718600-114733000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
34	chr2:114718600-114735400	Weak transcription	Adipose Nuclei	Adipose
35	chr2:114718800-114728600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
36	chr2:114718800-114729000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
37	chr2:114718800-114743200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
38	chr2:114719200-114728200	Weak transcription	GM12878-XiMat	blood
39	chr2:114719400-114729200	Weak transcription	Primary T helper cells fromperipheralblood	blood
40	chr2:114719400-114732400	Weak transcription	Rectal Mucosa Donor 29	rectum
41	chr2:114719600-114729600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
42	chr2:114719800-114729200	Weak transcription	Primary T cells fromperipheralblood	blood
43	chr2:114720000-114728600	Weak transcription	Primary T helper cells PMA-I stimulated	--
44	chr2:114721000-114729200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
45	chr2:114721200-114729800	Weak transcription	HMEC	breast
46	chr2:114721200-114733200	Weak transcription	NHEK	skin
47	chr2:114721200-114735800	Weak transcription	Skeletal Muscle Male	skeletal muscle
48	chr2:114721600-114728200	Weak transcription	Primary T cells from cord blood	blood
49	chr2:114722600-114728000	Weak transcription	NHDF-Ad	bronchial
50	chr2:114723400-114731400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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