Variant report

Variant	rs530775
Chromosome Location	chr11:64426933-64426934
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	TBL1XR1	chr11:64426919-64427599	K562	blood:	n/a	n/a
2	JUN	chr11:64426851-64427771	K562	blood:	n/a	chr11:64427528-64427539 chr11:64427532-64427541 chr11:64427531-64427541
3	E2F6	chr11:64426863-64427628	K562	blood:	n/a	n/a
4	POLR2A	chr11:64426379-64429236	U87	brain:	n/a	n/a
5	ZBTB7A	chr11:64426823-64427069	K562	blood:	n/a	n/a
6	JUN	chr11:64426857-64427661	K562	blood:	n/a	chr11:64427528-64427539 chr11:64427532-64427541 chr11:64427531-64427541
7	EGR1	chr11:64426903-64427185	K562	blood:	n/a	n/a
8	FOS	chr11:64426784-64427660	MCF10A-Er-Src	breast:	n/a	chr11:64427528-64427539 chr11:64427532-64427541 chr11:64427531-64427541
9	EP300	chr11:64426899-64427708	K562	blood:	n/a	chr11:64427488-64427495
10	RCOR1	chr11:64426782-64428118	IMR90	lung:	n/a	n/a
11	MAFF	chr11:64426824-64427670	K562	blood:	n/a	chr11:64427478-64427496
12	CTCF	chr11:64426860-64427010	HMEC	breast:	n/a	n/a
13	MYC	chr11:64426842-64427598	K562	blood:	n/a	chr11:64427531-64427540
14	POLR2A	chr11:64411167-64429413	U87	brain:	n/a	n/a
15	FOSL1	chr11:64426811-64427064	K562	blood:	n/a	n/a
16	FOS	chr11:64426860-64427682	MCF10A-Er-Src	breast:	n/a	chr11:64427528-64427539 chr11:64427532-64427541 chr11:64427531-64427541
17	MAFK	chr11:64426887-64427654	IMR90	lung:	n/a	n/a
18	RAD21	chr11:64426898-64427057	K562	blood:	n/a	n/a
19	MAFK	chr11:64426870-64427014	Hela-S3	cervix:	n/a	n/a
20	NR2F2	chr11:64426616-64427768	K562	blood:	n/a	n/a
21	RCOR1	chr11:64426844-64427710	K562	blood:	n/a	n/a
22	MAX	chr11:64426803-64427812	A549	lung:	n/a	chr11:64427531-64427540
23	MAX	chr11:64426718-64427690	K562	blood:	n/a	chr11:64427531-64427540
24	BACH1	chr11:64426880-64426968	H1-hESC	embryonic stem cell:	n/a	n/a
25	MAX	chr11:64426886-64427062	Hela-S3	cervix:	n/a	n/a
26	POLR2A	chr11:64414444-64429407	U87	brain:	n/a	n/a
27	NFE2	chr11:64426829-64427660	K562	blood:	n/a	chr11:64427531-64427541 chr11:64427480-64427495 chr11:64427486-64427495 chr11:64427447-64427462
28	MAFK	chr11:64426664-64427702	K562	blood:	n/a	n/a
29	BACH1	chr11:64426841-64427687	K562	blood:	n/a	chr11:64427529-64427543
30	CBX3	chr11:64426748-64427696	K562	blood:	n/a	n/a
31	E2F6	chr11:64426854-64427086	K562	blood:	n/a	n/a
32	FOSL2	chr11:64426813-64427760	SK-N-SH	brain:	n/a	chr11:64427528-64427539 chr11:64427532-64427541 chr11:64427531-64427541
33	JUN	chr11:64426769-64427734	K562	blood:	n/a	chr11:64427528-64427539 chr11:64427532-64427541 chr11:64427531-64427541
34	FOSL1	chr11:64426833-64427146	K562	blood:	n/a	n/a
35	MAZ	chr11:64426842-64427653	K562	blood:	n/a	chr11:64427531-64427540
36	FOSL1	chr11:64426715-64427805	HCT-116	colon:	n/a	chr11:64427528-64427539 chr11:64427532-64427541 chr11:64427530-64427541 chr11:64427531-64427541
37	BHLHE40	chr11:64426927-64427684	K562	blood:	n/a	n/a
38	POLR2A	chr11:64426821-64427789	K562	blood:	n/a	n/a
39	JUN	chr11:64426501-64427901	K562	blood:	n/a	chr11:64427528-64427539 chr11:64427532-64427541 chr11:64427531-64427541
40	FOSL1	chr11:64426754-64427823	HCT-116	colon:	n/a	chr11:64427528-64427539 chr11:64427532-64427541 chr11:64427530-64427541 chr11:64427531-64427541
41	BCL3	chr11:64426801-64427145	GM12878	blood:	n/a	n/a
42	MAX	chr11:64426866-64427731	K562	blood:	n/a	chr11:64427531-64427540
43	JUN	chr11:64426823-64427719	K562	blood:	n/a	chr11:64427528-64427539 chr11:64427532-64427541 chr11:64427531-64427541
44	POLR2A	chr11:64426828-64427682	K562	blood:	n/a	n/a
45	JUND	chr11:64426820-64427736	K562	blood:	n/a	chr11:64427528-64427539 chr11:64427530-64427541 chr11:64427532-64427541 chr11:64427531-64427541
46	FOS	chr11:64426853-64427684	MCF10A-Er-Src	breast:	n/a	chr11:64427528-64427539 chr11:64427532-64427541 chr11:64427531-64427541

No.	Distal block	Cell Line	Cell type
1	chr11:64424901..64427450-chr11:64452381..64454020,2	K562	blood:
2	chr11:64426863..64427525-chr11:64455907..64456498,2	K562	blood:
3	chr11:64425777..64427856-chr11:64437431..64439738,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SLC22A12-2	chr11:64426865-64427153	ENSG00000237410.1

Variant related genes	Relation type
NRXN2	TF binding region

Extended variants
information (count: 51 )
Associated
traits (count: 8 )

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10128590	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10792445	0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10897519	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.88[TSI][hapmap];0.89[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10897521	0.93[CEU][hapmap];0.90[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];0.86[JPT][hapmap];0.88[TSI][hapmap];0.89[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11231837	0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11231838	0.87[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11231848	0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11605121	0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1207179	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1207226	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];0.93[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.98[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1212146	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.99[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12269736	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17146216	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.92[TSI][hapmap];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2022051	0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2269730	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2285339	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.96[TSI][hapmap];0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2361216	0.88[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];0.96[TSI][hapmap];0.96[YRI][hapmap];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2957564	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2959654	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs471618	0.88[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs490192	0.88[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];0.96[TSI][hapmap];0.96[YRI][hapmap];0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs502567	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs506035	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs516117	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs530252	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs557709	0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55908793	0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs56105921	0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs61884406	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7117423	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.96[TSI][hapmap];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7121121	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];0.93[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7128467	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72927012	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7929296	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.92[TSI][hapmap];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7929627	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7932775	0.94[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.96[TSI][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7937990	0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs948689	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];0.96[TSI][hapmap];0.96[YRI][hapmap];0.98[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv897693	chr11:64305452-64440920	Enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
2	esv2422214	chr11:64312491-64483418	Weak transcription Enhancers Bivalent/Poised TSS Strong transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
3	nsv832188	chr11:64315368-64485209	Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
4	nsv468596	chr11:64334114-64527080	Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Active TSS Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
5	nsv555195	chr11:64334114-64527080	Bivalent Enhancer Weak transcription Strong transcription Flanking Bivalent TSS/Enh Enhancers Genic enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
6	nsv897694	chr11:64334114-64584959	Weak transcription Bivalent/Poised TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS Strong transcription Genic enhancers ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	83 gene(s)	inside rSNPs	diseases
7	nsv818842	chr11:64345448-64546391	Bivalent Enhancer Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
8	nsv528506	chr11:64345448-64701030	Strong transcription Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1075 gene(s)	inside rSNPs	diseases
9	nsv555196	chr11:64357072-64559898	Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	77 gene(s)	inside rSNPs	diseases
10	nsv897695	chr11:64357072-64701030	Weak transcription Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1075 gene(s)	inside rSNPs	diseases
11	nsv1051350	chr11:64372906-64533632	Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
12	nsv555198	chr11:64373899-64573589	Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	80 gene(s)	inside rSNPs	diseases
13	esv1804443	chr11:64386453-64534785	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases

mRNA abundance (count:8)

SNP	Gene	Cis/trans	Tissue	Source
rs530775	NRXN2	cis	lung	GTEx
rs530775	ADRBK1	cis	parietal	SCAN
rs530775	TRMT112	cis	cerebellum	SCAN
rs530775	NRXN2	cis	Muscle Skeletal	GTEx
rs530775	CDC42BPG	cis	parietal	SCAN
rs530775	PRDX5	cis	cerebellum	SCAN
rs530775	DDB1	cis	parietal	SCAN
rs530775	POLA2	cis	cerebellum	SCAN

Chromatin state (count:70 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:64411600-64427800	Weak transcription	Aorta	Aorta
2	chr11:64412400-64428200	Weak transcription	Right Atrium	heart
3	chr11:64415800-64430000	Weak transcription	Gastric	stomach
4	chr11:64420400-64427800	Enhancers	Fetal Thymus	thymus
5	chr11:64421000-64427200	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr11:64421000-64434800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr11:64421200-64427000	Weak transcription	Brain Angular Gyrus	brain
8	chr11:64421200-64453800	Weak transcription	Fetal Brain Male	brain
9	chr11:64421400-64428600	Weak transcription	Cortex derived primary cultured neurospheres	brain
10	chr11:64422400-64427200	Weak transcription	Brain Substantia Nigra	brain
11	chr11:64422800-64427400	Enhancers	Primary hematopoietic stem cells short term culture	blood
12	chr11:64423000-64430400	Strong transcription	Brain Germinal Matrix	brain
13	chr11:64423000-64432800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr11:64423600-64427200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr11:64424000-64427200	Weak transcription	Brain Anterior Caudate	brain
16	chr11:64424200-64428400	Weak transcription	Fetal Lung	lung
17	chr11:64424400-64427200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
18	chr11:64424400-64427400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr11:64424400-64435200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
20	chr11:64424600-64427200	Weak transcription	Brain Hippocampus Middle	brain
21	chr11:64424600-64427800	Weak transcription	Fetal Stomach	stomach
22	chr11:64424800-64427000	Weak transcription	Placenta	Placenta
23	chr11:64425000-64427000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
24	chr11:64425000-64429400	Strong transcription	Fetal Brain Female	brain
25	chr11:64425200-64427200	Strong transcription	Brain Cingulate Gyrus	brain
26	chr11:64425400-64428200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
27	chr11:64425800-64427000	Enhancers	NHDF-Ad	bronchial
28	chr11:64426000-64427800	Enhancers	Liver	Liver
29	chr11:64426000-64433000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
30	chr11:64426200-64427000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
31	chr11:64426400-64427000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
32	chr11:64426400-64427200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
33	chr11:64426400-64427400	Flanking Active TSS	K562	blood
34	chr11:64426400-64428000	Enhancers	Breast Myoepithelial Primary Cells	Breast
35	chr11:64426600-64427200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
36	chr11:64426600-64427200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
37	chr11:64426600-64427400	Enhancers	ES-I3 Cell Line	embryonic stem cell
38	chr11:64426600-64427400	Transcr. at gene 5' and 3'	HSMM	muscle
39	chr11:64426600-64427600	Genic enhancers	Fetal Muscle Leg	muscle
40	chr11:64426600-64427800	Enhancers	Adipose Nuclei	Adipose
41	chr11:64426600-64427800	Enhancers	Skeletal Muscle Female	skeletal muscle
42	chr11:64426600-64427800	Enhancers	Monocytes-CD14+_RO01746	blood
43	chr11:64426600-64428000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
44	chr11:64426600-64428000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr11:64426600-64428000	Enhancers	Primary monocytes fromperipheralblood	blood
46	chr11:64426600-64428000	Enhancers	A549	lung
47	chr11:64426600-64428200	Genic enhancers	Brain Dorsolateral Prefrontal Cortex	brain
48	chr11:64426600-64428400	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
49	chr11:64426600-64428600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
50	chr11:64426600-64428800	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links