The 2.0 version of rSNPBase

Variant report

Variant rs530928786
Chromosome Location chr19:44723680-44723681
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:44717400-44739000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr19:44717600-44725000 Weak transcription H9 Cell Line embryonic stem cell
3 chr19:44717600-44725200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr19:44717600-44730200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr19:44717600-44739600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr19:44717800-44731600 Weak transcription HSMMtube muscle
7 chr19:44717800-44732200 Weak transcription Stomach Mucosa stomach
8 chr19:44718000-44725000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr19:44718200-44723800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr19:44718200-44732400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr19:44718200-44732400 Weak transcription K562 blood
12 chr19:44718200-44732600 Weak transcription HepG2 liver
13 chr19:44718200-44732800 Weak transcription HMEC breast
14 chr19:44718200-44738800 Weak transcription Hela-S3 cervix
15 chr19:44718400-44732400 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr19:44718400-44736400 Weak transcription HUVEC blood vessel
17 chr19:44718600-44724800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr19:44718800-44723800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
19 chr19:44718800-44724000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr19:44718800-44724000 ZNF genes & repeats Liver Liver
21 chr19:44718800-44724000 Strong transcription Fetal Intestine Large intestine
22 chr19:44718800-44725000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr19:44718800-44725000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr19:44718800-44725600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr19:44719000-44723800 Strong transcription Primary T helper cells fromperipheralblood blood
26 chr19:44719000-44725000 Strong transcription Primary T helper cells PMA-I stimulated --
27 chr19:44719200-44723800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr19:44719600-44725200 Strong transcription Dnd41 blood
29 chr19:44719800-44723800 Strong transcription HUES48 Cell Line embryonic stem cell
30 chr19:44720400-44723800 ZNF genes & repeats GM12878-XiMat blood
31 chr19:44720600-44723800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
32 chr19:44720800-44723800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr19:44720800-44723800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr19:44720800-44723800 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
35 chr19:44721000-44724000 Strong transcription Sigmoid Colon Sigmoid Colon
36 chr19:44721200-44723800 Strong transcription Placenta Placenta
37 chr19:44721200-44723800 Strong transcription Skeletal Muscle Female skeletal muscle
38 chr19:44721400-44723800 ZNF genes & repeats Colon Smooth Muscle Colon
39 chr19:44721400-44723800 Strong transcription HSMM muscle
40 chr19:44721400-44723800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
41 chr19:44721600-44723800 Strong transcription HUES6 Cell Line embryonic stem cell
42 chr19:44722000-44723800 Strong transcription Primary T cells fromperipheralblood blood
43 chr19:44722000-44723800 Strong transcription Duodenum Mucosa Duodenum
44 chr19:44722000-44726000 Weak transcription Psoas Muscle Psoas
45 chr19:44722000-44730000 Weak transcription Gastric stomach
46 chr19:44722000-44730200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr19:44722000-44730800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr19:44722000-44732000 Weak transcription Colonic Mucosa Colon
49 chr19:44722000-44732400 Weak transcription Fetal Heart heart
50 chr19:44722200-44725200 Weak transcription Stomach Smooth Muscle stomach

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015