Variant report

Variant rs531119580
Chromosome Location chr13:53052412-53052413
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:53030200-53052600 Weak transcription Spleen Spleen
2 chr13:53030200-53053800 Weak transcription Small Intestine intestine
3 chr13:53030400-53055800 Weak transcription Lung lung
4 chr13:53030600-53052800 Weak transcription Brain Cingulate Gyrus brain
5 chr13:53034400-53054400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr13:53036000-53052600 Weak transcription Brain Inferior Temporal Lobe brain
7 chr13:53036800-53053000 Weak transcription Brain Germinal Matrix brain
8 chr13:53038000-53053200 Weak transcription Brain Angular Gyrus brain
9 chr13:53038200-53055400 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr13:53039800-53052800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
11 chr13:53041200-53053200 Weak transcription Fetal Stomach stomach
12 chr13:53041400-53052600 Weak transcription Placenta Placenta
13 chr13:53042800-53054400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr13:53043000-53052800 Weak transcription H9 Cell Line embryonic stem cell
15 chr13:53043600-53052800 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr13:53047200-53052800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr13:53047200-53053000 Weak transcription Thymus Thymus
18 chr13:53048600-53053200 Weak transcription Fetal Intestine Small intestine
19 chr13:53049200-53052600 Weak transcription GM12878-XiMat blood
20 chr13:53049400-53053000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr13:53049400-53054000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr13:53049600-53053000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr13:53049600-53054000 Weak transcription Liver Liver
24 chr13:53049800-53052800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr13:53050000-53052600 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr13:53050000-53052800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr13:53050000-53053000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
28 chr13:53050000-53053200 Weak transcription Duodenum Mucosa Duodenum
29 chr13:53050000-53053400 Weak transcription Muscle Satellite Cultured Cells --
30 chr13:53050000-53055400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr13:53050000-53058800 Weak transcription HepG2 liver
32 chr13:53050200-53052600 Weak transcription Fetal Lung lung
33 chr13:53050200-53052800 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr13:53050200-53052800 Weak transcription NHDF-Ad bronchial
35 chr13:53050400-53052600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr13:53051000-53053000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr13:53051000-53053600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr13:53051000-53055400 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr13:53051200-53052800 Weak transcription H1 Cell Line embryonic stem cell
40 chr13:53051200-53052800 Weak transcription Primary neutrophils fromperipheralblood blood
41 chr13:53051200-53052800 Weak transcription Primary B cells from cord blood blood
42 chr13:53051200-53052800 Weak transcription Primary B cells from peripheral blood blood
43 chr13:53051200-53052800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr13:53051200-53052800 Weak transcription Fetal Muscle Trunk muscle
45 chr13:53051200-53053400 Weak transcription HUES64 Cell Line embryonic stem cell
46 chr13:53051400-53053000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr13:53051400-53053000 Weak transcription iPS-20b Cell Line embryonic stem cell
48 chr13:53051400-53053000 Weak transcription Primary T cells from cord blood blood
49 chr13:53051400-53053000 Weak transcription Fetal Adrenal Gland Adrenal Gland
50 chr13:53051400-53053000 Weak transcription Fetal Brain Female brain

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